| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_1103 |
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| Symbol | mfd |
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| ID | 4683741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008787 |
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| Strand | - |
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| Start bp | 1018214 |
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| End bp | 1021150 |
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| Gene Length | 2937 bp |
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| Protein Length | 978 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 639853829 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_001000763 |
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| Protein GI | 121613373 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCTT CATTTTATGA ATACCTACAA AATCCAAAAA TTTGTGAACT TTTGCTTTGT
AAAGATGAAA AACAAGCAGA TTTACTCGCT CAAGTTTCAC GATTTAAGGG TTTAAAAACC
TTTGTTTTAC CTGATTTTAG AGCGCAGTTT GGAGATGATT TAAGGGCTTT TTCCAAAGAA
CTTTTTGATC TTTGCAAGAT TTTAAATGCT TATCATAAAG AAGAAGAAAA AAAAATCCTT
ATTTCTCCTT TAAATACTGT TTTAAAAAAA CTTCCTTCAA AAAAACATTT GCAAAATTAT
CATATCGATA AAAAACAAAA TTTTGATTTG AAATGTTTTG AAGATGAAAT TTCAAGATTG
GGATACGAAT TTGTAGATAT AGTTCAGGAT AAAGGTGAAA TTTCAATTCG TGCGGATATT
ATTGATATTT TTTGTATCAA TGAAGAAAAT CCTATTAGAA TTTTGCTTTT TGGCGAAGAG
ATTGAAAGTA TAAGATATTT TGATTTGCAA AGTCAAAAGT CTATTCCTAA CGAACTAGAA
CATTTTGAAA TTTGTCCTTT TTTAAAATAT TTTGACAAAG AAAATTATGA AATTTTTAAG
GACAAATTAG AAGATTTTCA AAGTGATACT TTAATACATG ATATCAATTC TTTAGGGTTT
TGGTGTATTG ATGATTTTTT TAATTATTTA GAACTTGATT TTTTAGCTTG TGAAAAGTTT
GATATTAACG AATATGAAAA AGATATAAGT TTTGTGAATG CAAAAATTTT ACCTCAAGCT
AAAAAATTTA AAGAATTGCA AAGTTCTTAC AATAAAGATT TTTTTGAATT TCATAAAAAT
AAAAAAATCA CACTTTTAGC TAAAAACGAA GCTTTGTTTA AAGCTTTGGA GCTTGAAGAT
ACTCAAAATA TCCATTTTGT AAAAAGTGAT TTAAGGCTTA ATCTTATTAG TCCTGAAGAG
CTAATCATTT CTTTAAATCA AAAAGAAAAA CAAAAAACAA GAAAAAAAGC TAGTTTGATT
ATAGATGAGC TTAAAAATGG GGATTATATA GTACACGAAG ATTATGGGGT AGGTAAATTT
TTAGGTCTTG AGATGATAGT GATAAGCGGA GCAAAAAAAG AGTTTGTTGC TATAGAGTAT
CAAAATTCTG ATAAGCTTTT ATTACCAGTG GAAAATCTTT ATTTAATTGA TAAATATTTG
GGCGTGAGTG GATCTATTCC AAGTTTAGAC AAATTAGGTA AAACAAGCTT TATTAAACTT
AAAGAAAAAT TAAAAACTAA ACTTTTAGCC ATAGCTTCTG AAATTGTTAT TATGGCAGCT
AAAAGATCTT TAGTGCAAGC AAAAAAAATC ACAGTGGATT TAAGTAGACA AGCTGATTTT
ATAACTAGTG CGGGTTTTAT TTATACAAGC GATCAAGAGA AAGCTTGTCA TGAAATTTTG
CAAGATTTTC AAAGTGGAAA AGTTATGGAT AGGCTTTTAA GCGGTGATGT GGGTTTTGGA
AAAACTGAAG TCGCTATGAA TGCTATTTAT CCAGTAGTTA AAAGTGGATT TTGTGCATTT
TTATTTGCGC CTACAACTTT GCTTTCTCAT CAGCATTATA AAACCTTAAA AAAGCGTTTT
GATCCTTTTG ATATAGAGGT TTTTAAACTG GATCGCTTTA CAAGTAGTGC AGAAAAAAAA
CAAGTTTTAC AAAATTTAAA AGAAAATAAA GCTTGTGTAG TTGTAGGAAC TCATGCGCTT
TTAAGTGTAG AATGTGAAAA TTTAGCCCTT GTTATTATTG ATGAAGAGCA TAAATTTGGA
GTGAAGCAAA AAGAAAAGCT TAAAGAAATC ACTCAAAATT CACATATTTT ATCCATGTCA
GCAACCCCTA TACCAAGAAG CTTAAATCAA GCTTTAAGTT CTATAAAATC TTATAGTGTT
TTGCAAACTC CACCAGAAGA TAGAATGGAT GTAAGAACTT TTGTCAAAGA AAATGATGAC
GCACTTTTAA AAGAAGCTAT AGCAAGAGAG TTAAGACGTG GTGGGCAAAT TTTTTATATT
CATAATCATA TTGCAAGTAT AGAGCAATGC AAAAAACATT TATTAGAACT TTTTTCTACT
TTGCGTATTT TGATTTTGCA TTCTAAAATC GATGCCAAGG TGCAAGAAGA AGAAATGTTG
AAATTTGAAA ACAAAGAATA TGATTTGCTT TTAAGTACCT CTATCGTAGA AAGTGGGATT
GATTTACCTA ATGCAAATAC TATTATAGTA GAAAAAAGCG ATCGTTTTGG TATGGCCGAT
TTGCACCAAT TGCGTGGGCG TGTGGGAAGA AGTGATAAGC AAGGTTATTG TTATTTTTTA
ATCGAAGATA AAAATGCTAT CACAAAAGAT GCTTTAAAGC GTCTAGTTTC TTTAGAAAGT
AATTCTTTTT TAGGTGCAGG TTCTGTTTTG GCTTATCATG ATCTTGAAAT TCGTGGCGGT
GGAAATTTAT TAGGCGTGGA TCAAAGTGGA CATATCGAGC AAATTGGATA TAGCTTATAT
CTTAAAATGT TAGAAGATGA ACTTAATGCT TTAAGTAAAA ATGAAGTGGA TCAAAAAGAA
AATAAACTTG ATTTAAAACT CAATGTTAAT GCCTTTTTAA ACAGCGAACT TATCAGCGAA
GATCGCTTAA GATTAGAACT TTATAGAAGA CTTAGCAAGT GTGAGCAAGT TCATGAGGTT
TATGAGATCG AAGGTGAAAT TGAAGATCGC TTTGGAAAAC TTGACATTTA TACTAAGCAA
TTTTTATCTT TGATTATTAT TAAAATTTTA GCTTTAAATA AATTTAAAAG TATTAGCAAT
TATGAGCAAA ATATTCAATT TACTGCTTTA AATGATGAAA AAGAACTCAT CAAGGCAAAA
AGCAAAGACG ATGATGATAT TTTAGAGGCA ATTTTGACGC ATTTAAGAAA GGCTTAA
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| Protein sequence | MQASFYEYLQ NPKICELLLC KDEKQADLLA QVSRFKGLKT FVLPDFRAQF GDDLRAFSKE
LFDLCKILNA YHKEEEKKIL ISPLNTVLKK LPSKKHLQNY HIDKKQNFDL KCFEDEISRL
GYEFVDIVQD KGEISIRADI IDIFCINEEN PIRILLFGEE IESIRYFDLQ SQKSIPNELE
HFEICPFLKY FDKENYEIFK DKLEDFQSDT LIHDINSLGF WCIDDFFNYL ELDFLACEKF
DINEYEKDIS FVNAKILPQA KKFKELQSSY NKDFFEFHKN KKITLLAKNE ALFKALELED
TQNIHFVKSD LRLNLISPEE LIISLNQKEK QKTRKKASLI IDELKNGDYI VHEDYGVGKF
LGLEMIVISG AKKEFVAIEY QNSDKLLLPV ENLYLIDKYL GVSGSIPSLD KLGKTSFIKL
KEKLKTKLLA IASEIVIMAA KRSLVQAKKI TVDLSRQADF ITSAGFIYTS DQEKACHEIL
QDFQSGKVMD RLLSGDVGFG KTEVAMNAIY PVVKSGFCAF LFAPTTLLSH QHYKTLKKRF
DPFDIEVFKL DRFTSSAEKK QVLQNLKENK ACVVVGTHAL LSVECENLAL VIIDEEHKFG
VKQKEKLKEI TQNSHILSMS ATPIPRSLNQ ALSSIKSYSV LQTPPEDRMD VRTFVKENDD
ALLKEAIARE LRRGGQIFYI HNHIASIEQC KKHLLELFST LRILILHSKI DAKVQEEEML
KFENKEYDLL LSTSIVESGI DLPNANTIIV EKSDRFGMAD LHQLRGRVGR SDKQGYCYFL
IEDKNAITKD ALKRLVSLES NSFLGAGSVL AYHDLEIRGG GNLLGVDQSG HIEQIGYSLY
LKMLEDELNA LSKNEVDQKE NKLDLKLNVN AFLNSELISE DRLRLELYRR LSKCEQVHEV
YEIEGEIEDR FGKLDIYTKQ FLSLIIIKIL ALNKFKSISN YEQNIQFTAL NDEKELIKAK
SKDDDDILEA ILTHLRKA
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