Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3764 |
Symbol | |
ID | 4183787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 4353975 |
End bp | 4355066 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638073751 |
Product | fatty acid desaturase |
Protein accession | YP_680340 |
Protein GI | 110640130 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3239] Fatty acid desaturase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAACAA CTCCTCGTTT AAAGTTTATC GACACTAAAA ATTCGCAGTT CTTTGCAACT GTGAAGCGTA ACGTTGATTT ATATTTCAAA GAAAATAATA TTTCAAAAAA TGCAAATGCA TTGATGATCT TTAAAAGTAT CTTTTTCTTT GGTGGTGTTT GGGTTTTTTA TGGTTTGATT CTTTCTCAAA ACTTTTCCTT GTCAGTCATG CTGATTCTGG CTATGTTAAT GGGGGTATTT AAAGCAGCGT CTGCTTTTAA TATTTCACAT GATGCCATGC ATGGTTCCTA TTCTTCAAAA GAATGGGTGA ATAATTTACT TGCGTATACA TTCAACATTC TGGGTGCAAA CATTTCTGTT TGGGTAGTAA GCCACAATAT TGTTCATCAT ACATTCACCA ACATTGAAGA GCACGATGAA GATCTGATCA TTGCTCCGGG TTTGATCCGA CTTACAGATG GTGATAAAAA ATCAAAAATT CAGCGTTTCC AGCATTTATA TGCCTTCTTC CTGTATGGGT TTGCAAGCCT TTCCTGGGTA CTTCGTAAAG ACTATATGAA AATGTTCCAG GATAAAATCG GCCAGCATGT AACCAAGCAT TATACAAAAA GAGATTATAT CGAATTGTTT TTATACAAGG CAATTAACTA TACCATCTTT ATTGTAATTC CTTTAGTTGT GCTGGATATT ACCTGGTGGC AGTTCCTGAT CGGCTTTATT GCGATGCACT TTGCAATGGG CTTCACACTT GGCCTTGTGT TTCAATTGGC GCACGTAGTT GAAGAGACAT CTTTCCCTGT TACGAATGGT GAAGGAAATA TTGAAGAAGC ATGGGCCGTA CATCAGATGT GTACGACTGC CAACTTCGGG ATGGATTCAT TCTTAACAAG CTTTATTTGC GGTGGTTTGA ATTTTCAGGT TGAACACCAT TTGTTCCCAA AAGTTTGTCA TATCCATTAT CCGGCTATTT CAAAGATTGT TAGAGAAACG GCTGAATCTA TGAATGTACC TTATCTATAT AACGATACAT TCTTTACAGC GCTACAATCA CATTATCAAG TACTCAAAAA ATTCAGCCTG GAAGCTGCAT AA
|
Protein sequence | MSTTPRLKFI DTKNSQFFAT VKRNVDLYFK ENNISKNANA LMIFKSIFFF GGVWVFYGLI LSQNFSLSVM LILAMLMGVF KAASAFNISH DAMHGSYSSK EWVNNLLAYT FNILGANISV WVVSHNIVHH TFTNIEEHDE DLIIAPGLIR LTDGDKKSKI QRFQHLYAFF LYGFASLSWV LRKDYMKMFQ DKIGQHVTKH YTKRDYIELF LYKAINYTIF IVIPLVVLDI TWWQFLIGFI AMHFAMGFTL GLVFQLAHVV EETSFPVTNG EGNIEEAWAV HQMCTTANFG MDSFLTSFIC GGLNFQVEHH LFPKVCHIHY PAISKIVRET AESMNVPYLY NDTFFTALQS HYQVLKKFSL EAA
|
| |