Gene CHU_3764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3764 
Symbol 
ID4183787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4353975 
End bp4355066 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content37% 
IMG OID638073751 
Productfatty acid desaturase 
Protein accessionYP_680340 
Protein GI110640130 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACAA CTCCTCGTTT AAAGTTTATC GACACTAAAA ATTCGCAGTT CTTTGCAACT 
GTGAAGCGTA ACGTTGATTT ATATTTCAAA GAAAATAATA TTTCAAAAAA TGCAAATGCA
TTGATGATCT TTAAAAGTAT CTTTTTCTTT GGTGGTGTTT GGGTTTTTTA TGGTTTGATT
CTTTCTCAAA ACTTTTCCTT GTCAGTCATG CTGATTCTGG CTATGTTAAT GGGGGTATTT
AAAGCAGCGT CTGCTTTTAA TATTTCACAT GATGCCATGC ATGGTTCCTA TTCTTCAAAA
GAATGGGTGA ATAATTTACT TGCGTATACA TTCAACATTC TGGGTGCAAA CATTTCTGTT
TGGGTAGTAA GCCACAATAT TGTTCATCAT ACATTCACCA ACATTGAAGA GCACGATGAA
GATCTGATCA TTGCTCCGGG TTTGATCCGA CTTACAGATG GTGATAAAAA ATCAAAAATT
CAGCGTTTCC AGCATTTATA TGCCTTCTTC CTGTATGGGT TTGCAAGCCT TTCCTGGGTA
CTTCGTAAAG ACTATATGAA AATGTTCCAG GATAAAATCG GCCAGCATGT AACCAAGCAT
TATACAAAAA GAGATTATAT CGAATTGTTT TTATACAAGG CAATTAACTA TACCATCTTT
ATTGTAATTC CTTTAGTTGT GCTGGATATT ACCTGGTGGC AGTTCCTGAT CGGCTTTATT
GCGATGCACT TTGCAATGGG CTTCACACTT GGCCTTGTGT TTCAATTGGC GCACGTAGTT
GAAGAGACAT CTTTCCCTGT TACGAATGGT GAAGGAAATA TTGAAGAAGC ATGGGCCGTA
CATCAGATGT GTACGACTGC CAACTTCGGG ATGGATTCAT TCTTAACAAG CTTTATTTGC
GGTGGTTTGA ATTTTCAGGT TGAACACCAT TTGTTCCCAA AAGTTTGTCA TATCCATTAT
CCGGCTATTT CAAAGATTGT TAGAGAAACG GCTGAATCTA TGAATGTACC TTATCTATAT
AACGATACAT TCTTTACAGC GCTACAATCA CATTATCAAG TACTCAAAAA ATTCAGCCTG
GAAGCTGCAT AA
 
Protein sequence
MSTTPRLKFI DTKNSQFFAT VKRNVDLYFK ENNISKNANA LMIFKSIFFF GGVWVFYGLI 
LSQNFSLSVM LILAMLMGVF KAASAFNISH DAMHGSYSSK EWVNNLLAYT FNILGANISV
WVVSHNIVHH TFTNIEEHDE DLIIAPGLIR LTDGDKKSKI QRFQHLYAFF LYGFASLSWV
LRKDYMKMFQ DKIGQHVTKH YTKRDYIELF LYKAINYTIF IVIPLVVLDI TWWQFLIGFI
AMHFAMGFTL GLVFQLAHVV EETSFPVTNG EGNIEEAWAV HQMCTTANFG MDSFLTSFIC
GGLNFQVEHH LFPKVCHIHY PAISKIVRET AESMNVPYLY NDTFFTALQS HYQVLKKFSL
EAA