Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3712 |
Symbol | |
ID | 4184490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 4284654 |
End bp | 4285835 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638073699 |
Product | SAM-dependent methyltransferase |
Protein accession | YP_680288 |
Protein GI | 110640078 |
COG category | [R] General function prediction only |
COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.100663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAATTC CGATTCTTCA GTTAAAAAAG GGTAAAGAGC GTTCAATCAA CAACCGCCAT CCGTGGATCT TTTCAGGGGC AGTTGCAAAA TTACCTGAAA ACGAAGAAGG AACAATTGTA GCTGTTACAG ATTTCGAAAA CAAAAAACTG GGTTATGGAT TTTTATCGCA CAAAAGCCAG ATTGTGTGCA GAATGTTTGA GTGGGACACT CTTACAGAAG AAGTTCTTAC AGAAAATTAT TGGGCAGTTA AATTAAAAAA TGCGTTCGCA CTGCGCCAGA CAGTTATACA ATTCGGAAAA ACAAATGTTT ATCGCTTACT GCATGCAGAA GGGGATTTTT TTCCGGGCAT TATTGCGGAT GTATATGCTG ATGTAGTGGT ATTGCAGGTA TTGATACGCG GCGTAGAAAA AATTGTGCCG GCCATTCAGA AAGCCCTTGT TGAAATTGGT TTTAAGCATA TTTATATAAA AGCAAAAACA TCATCAACGG TACTGGAAGA TATACGTACA GGAAGCGGCT GGCTGCTTGG CGGGGTAGAA GTACCGGTCA TTGTTAAAGA AAACGATGTG TTGTTTGAGG TTGATTTTAT TGATGGACAG AAAACCGGAT TCTTTGTTGA TCAGCGTGAA AACAGAGAAC TGCTGCGTTC CTATTCAAAA GGTAAAAAAG TATTAAATAC ATTTTGTTAT ACCGGAGGCT TCAGTGTATA TGCGGCTTCA GGCGGTGCAG AAGTCGTTGA CTCGGTTGAT ATATCAAAAG AGGCTGTTGC GCTGGCTGGA AAAAATATGG AGCTGAATTA TCCGGGTTAT AAGCACGGTA CGATTGCGGC AGACTGCTTT GATTTTTTAG GAGATATTGA AAAGGATTAT TACGATATTA TTGTTCTTGA TCCGCCTGCA TTTGCAAAAT CTGCCAAAGC AGTTGCTAAT GCCTGTCGTG GTTATAAGCA GATCAATTTA AAAGCATTCC GTAAAATAAA GAAAGGCGGC TTGTTATTTA CCTATTCCTG TTCGCAGAAT ATAGATAAAG ACCTGTTTCA AAAGATTGTT TTCGGCGCAG CGGCAGACTC TTATAGAAAT GTGCGTATCA TACATCAGAT GCATCAGCCG GCAGATCACC CGATAAACAT TTACCATCCG GAAGGTGAAT ACCTGAAAGG ACTGGTACTC TATGTTGAAT AA
|
Protein sequence | MAIPILQLKK GKERSINNRH PWIFSGAVAK LPENEEGTIV AVTDFENKKL GYGFLSHKSQ IVCRMFEWDT LTEEVLTENY WAVKLKNAFA LRQTVIQFGK TNVYRLLHAE GDFFPGIIAD VYADVVVLQV LIRGVEKIVP AIQKALVEIG FKHIYIKAKT SSTVLEDIRT GSGWLLGGVE VPVIVKENDV LFEVDFIDGQ KTGFFVDQRE NRELLRSYSK GKKVLNTFCY TGGFSVYAAS GGAEVVDSVD ISKEAVALAG KNMELNYPGY KHGTIAADCF DFLGDIEKDY YDIIVLDPPA FAKSAKAVAN ACRGYKQINL KAFRKIKKGG LLFTYSCSQN IDKDLFQKIV FGAAADSYRN VRIIHQMHQP ADHPINIYHP EGEYLKGLVL YVE
|
| |