Gene CHU_3712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3712 
Symbol 
ID4184490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4284654 
End bp4285835 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content40% 
IMG OID638073699 
ProductSAM-dependent methyltransferase 
Protein accessionYP_680288 
Protein GI110640078 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.100663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTC CGATTCTTCA GTTAAAAAAG GGTAAAGAGC GTTCAATCAA CAACCGCCAT 
CCGTGGATCT TTTCAGGGGC AGTTGCAAAA TTACCTGAAA ACGAAGAAGG AACAATTGTA
GCTGTTACAG ATTTCGAAAA CAAAAAACTG GGTTATGGAT TTTTATCGCA CAAAAGCCAG
ATTGTGTGCA GAATGTTTGA GTGGGACACT CTTACAGAAG AAGTTCTTAC AGAAAATTAT
TGGGCAGTTA AATTAAAAAA TGCGTTCGCA CTGCGCCAGA CAGTTATACA ATTCGGAAAA
ACAAATGTTT ATCGCTTACT GCATGCAGAA GGGGATTTTT TTCCGGGCAT TATTGCGGAT
GTATATGCTG ATGTAGTGGT ATTGCAGGTA TTGATACGCG GCGTAGAAAA AATTGTGCCG
GCCATTCAGA AAGCCCTTGT TGAAATTGGT TTTAAGCATA TTTATATAAA AGCAAAAACA
TCATCAACGG TACTGGAAGA TATACGTACA GGAAGCGGCT GGCTGCTTGG CGGGGTAGAA
GTACCGGTCA TTGTTAAAGA AAACGATGTG TTGTTTGAGG TTGATTTTAT TGATGGACAG
AAAACCGGAT TCTTTGTTGA TCAGCGTGAA AACAGAGAAC TGCTGCGTTC CTATTCAAAA
GGTAAAAAAG TATTAAATAC ATTTTGTTAT ACCGGAGGCT TCAGTGTATA TGCGGCTTCA
GGCGGTGCAG AAGTCGTTGA CTCGGTTGAT ATATCAAAAG AGGCTGTTGC GCTGGCTGGA
AAAAATATGG AGCTGAATTA TCCGGGTTAT AAGCACGGTA CGATTGCGGC AGACTGCTTT
GATTTTTTAG GAGATATTGA AAAGGATTAT TACGATATTA TTGTTCTTGA TCCGCCTGCA
TTTGCAAAAT CTGCCAAAGC AGTTGCTAAT GCCTGTCGTG GTTATAAGCA GATCAATTTA
AAAGCATTCC GTAAAATAAA GAAAGGCGGC TTGTTATTTA CCTATTCCTG TTCGCAGAAT
ATAGATAAAG ACCTGTTTCA AAAGATTGTT TTCGGCGCAG CGGCAGACTC TTATAGAAAT
GTGCGTATCA TACATCAGAT GCATCAGCCG GCAGATCACC CGATAAACAT TTACCATCCG
GAAGGTGAAT ACCTGAAAGG ACTGGTACTC TATGTTGAAT AA
 
Protein sequence
MAIPILQLKK GKERSINNRH PWIFSGAVAK LPENEEGTIV AVTDFENKKL GYGFLSHKSQ 
IVCRMFEWDT LTEEVLTENY WAVKLKNAFA LRQTVIQFGK TNVYRLLHAE GDFFPGIIAD
VYADVVVLQV LIRGVEKIVP AIQKALVEIG FKHIYIKAKT SSTVLEDIRT GSGWLLGGVE
VPVIVKENDV LFEVDFIDGQ KTGFFVDQRE NRELLRSYSK GKKVLNTFCY TGGFSVYAAS
GGAEVVDSVD ISKEAVALAG KNMELNYPGY KHGTIAADCF DFLGDIEKDY YDIIVLDPPA
FAKSAKAVAN ACRGYKQINL KAFRKIKKGG LLFTYSCSQN IDKDLFQKIV FGAAADSYRN
VRIIHQMHQP ADHPINIYHP EGEYLKGLVL YVE