Gene CHU_3606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3606 
SymbolfucP 
ID4184812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4160566 
End bp4161843 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content39% 
IMG OID638073593 
Productfucose permease 
Protein accessionYP_680182 
Protein GI110639972 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAGCA ATAGCAATAC TACCATTAAT TACACGAAAG TCTTTTTAGT GCTTTCCACC 
CTGTTCTTCA TGTGGGGTTT AATAACAGTG CTTAATATTT CCTTAATAGA AGAATTAAGA
GATGTCTTTC AATTAAGTTT TGAAGAATCA TTAAGTATAA ACCTGGCTTT GTACGGCACG
TATTTTATTA TTGCTCTGCC AGCCGGCTGG GTAATAAATA AAGTAGGCTT TAGAAAAGGC
ATTATTATTG GAGCCGGCTT AGCCAGTTTC GGTTGCTTTT TGTTTTATCC GGCAGCCGCT
TCCAGTTCAT TTGTAAAATT ATTACTTGCA CTGTTTGTAC TTGGTTCGGG CTTTACATTT
TTACAGGTAG CCGCAAACCC ATATGTTGCC TTGCTGGGTA TGCGCGGCAA AGGAGCTGCT
AAACTTTCAT TTATTCAGGC ATTCAATTCT TTTGGAACAT TTCTGGCGCC ATTACTGGCA
GGCGGTTTGT TTTTATCGAT AGCCGGGCTT AAACCAACAA GTTTTGCAAC CATGGCTCCG
GAAGAACTGA TGCAGCATAA AATATTACTG GTACAGATGC CGTATCTGTT ATTCGGCTCT
ATCTGGTTTT TATTGATGCT AATTGTTACG TTATCAGAAT TACCTAGAAT AAATATGCAG
GATCAGCCGC CGCTGATACG CAACAATGAA AAAGAACCAA GAAAATTTTT GTTGCAGTAT
CCTCAGGTAG TAAACGGAGC AATCACCTTG TTTTTATATG TAGGCGCTGA AGTATCGCTG
GCATATTACA TATCTATGAA AAGTGAAACG TTAATCCCGT ACTACTGGGG TTGCGCGCTG
TTAGGCAGGT TCATTGGTGC AGGATTGCTT TTCGTTGCAA CAAGCCCGCG TAAAATGATG
AAATTTTCAG GTTCTGTAGC GTTATTCCTA TTGCTGGTTT ACATGATCAT CAACAATGAT
GATAAGTATA TCGTAAACAT GAATCAGGAA ACAGATCCGG CTTTGTACTT ACTTGTTTTA
ATCGGCTTGT GTAATTCGGT TATCTGGCCA ACGGTATTTA CCATGGGTAT TGATGGTATG
GGCAAATACT CCATTAATGC CAGTGCATTA TTAGTTATGT CGGTATTCGG TGGTGCGGTT
ATACCGTTCA TCTTTATTTA TCTGTTAACA GATTACTCCA TTATATCGGC ATTCCCGATC
TTGCTTATTG CGTATGGGTT TTTGATCTGG TTTGGATCGA AAGGATCCAT CTATGAAAAG
AAAAACAATT TCTATTGA
 
Protein sequence
MYSNSNTTIN YTKVFLVLST LFFMWGLITV LNISLIEELR DVFQLSFEES LSINLALYGT 
YFIIALPAGW VINKVGFRKG IIIGAGLASF GCFLFYPAAA SSSFVKLLLA LFVLGSGFTF
LQVAANPYVA LLGMRGKGAA KLSFIQAFNS FGTFLAPLLA GGLFLSIAGL KPTSFATMAP
EELMQHKILL VQMPYLLFGS IWFLLMLIVT LSELPRINMQ DQPPLIRNNE KEPRKFLLQY
PQVVNGAITL FLYVGAEVSL AYYISMKSET LIPYYWGCAL LGRFIGAGLL FVATSPRKMM
KFSGSVALFL LLVYMIINND DKYIVNMNQE TDPALYLLVL IGLCNSVIWP TVFTMGIDGM
GKYSINASAL LVMSVFGGAV IPFIFIYLLT DYSIISAFPI LLIAYGFLIW FGSKGSIYEK
KNNFY