Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3606 |
Symbol | fucP |
ID | 4184812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 4160566 |
End bp | 4161843 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638073593 |
Product | fucose permease |
Protein accession | YP_680182 |
Protein GI | 110639972 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAGCA ATAGCAATAC TACCATTAAT TACACGAAAG TCTTTTTAGT GCTTTCCACC CTGTTCTTCA TGTGGGGTTT AATAACAGTG CTTAATATTT CCTTAATAGA AGAATTAAGA GATGTCTTTC AATTAAGTTT TGAAGAATCA TTAAGTATAA ACCTGGCTTT GTACGGCACG TATTTTATTA TTGCTCTGCC AGCCGGCTGG GTAATAAATA AAGTAGGCTT TAGAAAAGGC ATTATTATTG GAGCCGGCTT AGCCAGTTTC GGTTGCTTTT TGTTTTATCC GGCAGCCGCT TCCAGTTCAT TTGTAAAATT ATTACTTGCA CTGTTTGTAC TTGGTTCGGG CTTTACATTT TTACAGGTAG CCGCAAACCC ATATGTTGCC TTGCTGGGTA TGCGCGGCAA AGGAGCTGCT AAACTTTCAT TTATTCAGGC ATTCAATTCT TTTGGAACAT TTCTGGCGCC ATTACTGGCA GGCGGTTTGT TTTTATCGAT AGCCGGGCTT AAACCAACAA GTTTTGCAAC CATGGCTCCG GAAGAACTGA TGCAGCATAA AATATTACTG GTACAGATGC CGTATCTGTT ATTCGGCTCT ATCTGGTTTT TATTGATGCT AATTGTTACG TTATCAGAAT TACCTAGAAT AAATATGCAG GATCAGCCGC CGCTGATACG CAACAATGAA AAAGAACCAA GAAAATTTTT GTTGCAGTAT CCTCAGGTAG TAAACGGAGC AATCACCTTG TTTTTATATG TAGGCGCTGA AGTATCGCTG GCATATTACA TATCTATGAA AAGTGAAACG TTAATCCCGT ACTACTGGGG TTGCGCGCTG TTAGGCAGGT TCATTGGTGC AGGATTGCTT TTCGTTGCAA CAAGCCCGCG TAAAATGATG AAATTTTCAG GTTCTGTAGC GTTATTCCTA TTGCTGGTTT ACATGATCAT CAACAATGAT GATAAGTATA TCGTAAACAT GAATCAGGAA ACAGATCCGG CTTTGTACTT ACTTGTTTTA ATCGGCTTGT GTAATTCGGT TATCTGGCCA ACGGTATTTA CCATGGGTAT TGATGGTATG GGCAAATACT CCATTAATGC CAGTGCATTA TTAGTTATGT CGGTATTCGG TGGTGCGGTT ATACCGTTCA TCTTTATTTA TCTGTTAACA GATTACTCCA TTATATCGGC ATTCCCGATC TTGCTTATTG CGTATGGGTT TTTGATCTGG TTTGGATCGA AAGGATCCAT CTATGAAAAG AAAAACAATT TCTATTGA
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Protein sequence | MYSNSNTTIN YTKVFLVLST LFFMWGLITV LNISLIEELR DVFQLSFEES LSINLALYGT YFIIALPAGW VINKVGFRKG IIIGAGLASF GCFLFYPAAA SSSFVKLLLA LFVLGSGFTF LQVAANPYVA LLGMRGKGAA KLSFIQAFNS FGTFLAPLLA GGLFLSIAGL KPTSFATMAP EELMQHKILL VQMPYLLFGS IWFLLMLIVT LSELPRINMQ DQPPLIRNNE KEPRKFLLQY PQVVNGAITL FLYVGAEVSL AYYISMKSET LIPYYWGCAL LGRFIGAGLL FVATSPRKMM KFSGSVALFL LLVYMIINND DKYIVNMNQE TDPALYLLVL IGLCNSVIWP TVFTMGIDGM GKYSINASAL LVMSVFGGAV IPFIFIYLLT DYSIISAFPI LLIAYGFLIW FGSKGSIYEK KNNFY
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