Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3561 |
Symbol | pgl |
ID | 4184398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 4110800 |
End bp | 4111822 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638073548 |
Product | gluconolactonase |
Protein accession | YP_680137 |
Protein GI | 110639927 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.276936 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT ATATTTTAAT TTCCGTACTT TTCGCTGCTG CCTTTGCAGC ATGCACACAT GAAAAACCAG CTACACAGGT AACGCTTATG GATACGCTTA GTGAAATAGA GATCTTAGAT CCTGAAGCAG AAAAATTATT TTCTAAAGAA ACAAAAGCTG AAGTTATTGC ATCAGGCTTT TTATGGTCGG AAGGACCGCT ATGGTTAAAA GACGAACAAA AATTAATTTT TTCTGATGTG CCAAGAAACA GAATCAACAG CTGGTCTGAA AAAGACAGCT TACAGCTTTA TCTTGAACCG TCTGGCTATA CAGACACCAT TAAACGTGGC GGCGAAACAG GATCAAATGG TTTGTGTTTA AGCAAAGACG GAAAATTAAT TTTAGCACAA CACGGAGACA GACGTATTGC TGAAATGCAG GCACCATTAA ATGCGCCGAA GGCAGATTTT AAAACACTTG CCGGCACATT TAACGGTAAA CGTTTCAGCA GCCCGAACGA TGTGTGTGCA GACAGCAAAG GAAATTATTA TTTTACAGAT CCTCCGTACG GACTAGAAAA ACAGGAAAAT GATCCGGCAA AAGAACAGCC AAAAGAAGGC GTATATAGAA TCAATGCAGA TGGATCGGTA GAGCAGCTTA TTGATTCATT AACGCGCCCC AACGGTGTAA TTGTTTCAAA TGACGGCAGT AAATTATACG TAGCGAACTC TGATCCGGCG CGGGCTATCT GGGCAGTATA CGATATTGAT GCAGCAGGTA AATTGTCCAA TGGAAAAATA TTGATGGATG CCACTGCGTA TGTACCTAAA GGTAAAGGCT TGCCGGACGG TTTAAAAATG AACAAGGCGG GCTACATTTA TGCTACAGGC CCTTGCGGTG TCTGGGTATT TAATCCTTCC GGAAAACATA TTGCAACGAT AAAGATTAAA GAACACGCTT CTAATGTCGC ATTAGATGAT ACAGAATCTT ATTTATACAT TACGGCAAAC ATGTATTTGT TACGCTTGAA ACTAGCTAAA TGA
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Protein sequence | MKKYILISVL FAAAFAACTH EKPATQVTLM DTLSEIEILD PEAEKLFSKE TKAEVIASGF LWSEGPLWLK DEQKLIFSDV PRNRINSWSE KDSLQLYLEP SGYTDTIKRG GETGSNGLCL SKDGKLILAQ HGDRRIAEMQ APLNAPKADF KTLAGTFNGK RFSSPNDVCA DSKGNYYFTD PPYGLEKQEN DPAKEQPKEG VYRINADGSV EQLIDSLTRP NGVIVSNDGS KLYVANSDPA RAIWAVYDID AAGKLSNGKI LMDATAYVPK GKGLPDGLKM NKAGYIYATG PCGVWVFNPS GKHIATIKIK EHASNVALDD TESYLYITAN MYLLRLKLAK
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