Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3547 |
Symbol | |
ID | 4186601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 4102492 |
End bp | 4103106 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638073534 |
Product | outer membrane protein |
Protein accession | YP_680123 |
Protein GI | 110639913 |
COG category | [S] Function unknown |
COG ID | [COG3652] Predicted outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00647416 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0413826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGCAA TCATGAAAGA CATATCAAGT ATTAAAACAA TCTTTCTTCA GATAAGTTGC TTTTTAGGAT TAATGCTGGG GGTATCCGTA TTATTTTCAA GTTCCTTCTG CAATAAATCA GCAGCCAAAT CGGCTTCCAT AGTAAATCAG GTCAATGATT CAAAATTCAG TTCAGATGCA GACCGAAAAA ATGCGCTGAT TTTAGTTTCA ACAGCAGAGA TTTGTTTGAG GGAAATTAAA CTCGCACAGT TAGCTCAGAA GAGAGCGAAA ACAGCAGATG TTAAAGAATT GGGCAAAATG AATGAAGAGT TTTATACACA AAAATTATTA TCTGTTATTA AGCTGGCAAA AATAAAATCC ATCTCGATTC CAACATCGCT TAGCACAGAA GGCGAAAAAA TTTTTACGGA GCTTGAGAAT AAATCAGAAG CATCGTTTGA TGAATATTAT TGTGACGAGA TGATATACAA TCATAAGCAA ACGATTAATT TTTTTGAAGC CGTTTATTCG GAAACCAGTG ATGAATATAT AAACGCCTGG GCTAAAAATA TGATTCCGGA TCTGGACAAG CAATTATCGT ATGCAGTGCT TTGTCAGAGA AGTGCAACTA AATAA
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Protein sequence | MHAIMKDISS IKTIFLQISC FLGLMLGVSV LFSSSFCNKS AAKSASIVNQ VNDSKFSSDA DRKNALILVS TAEICLREIK LAQLAQKRAK TADVKELGKM NEEFYTQKLL SVIKLAKIKS ISIPTSLSTE GEKIFTELEN KSEASFDEYY CDEMIYNHKQ TINFFEAVYS ETSDEYINAW AKNMIPDLDK QLSYAVLCQR SATK
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