| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3544 |
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| Symbol | ydiP |
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| ID | 4186598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 4099544 |
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| End bp | 4100104 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638073531 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_680120 |
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| Protein GI | 110639910 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000242227 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0918221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCTCT ATTTAAAATT TGACATAAAT ACCATTTGTA AAAAGGTATT ACAGGAACAA
CTGGAGACAT TAAATCTAAA CTATTCAGTA CTTGGTTTTG GTGAAGTTGA AATCAACAAT
GACCCTTCTG CAGAAACCAT AAAAAAATTA AATCAAAACT TAAATGATTA TGGTATTTCT
GTTGTAGAAA GCCATAAGAG TGTTTTGGTA CAAAAGATCA AAGACGCCAT TGTTGAAATG
GTATATTCAG AAGAGAAATT GTCCAATTCA AAAACGTCAG CATATCTGGC AGACAAGATT
GGCCAAAGCT ATGGATACAT TTCAAATCTT TTTTCTGATG TGACGTATAC ATCTATTGCC
AATTTCATTA TTCTGCAAAA GATTGAACGT GCCAAGCAAT TGATATTGAC AAATGAGTTA
ACCATTACTG AAATTGCCTG GAAGCTGAAC TACAGCAGTG TTGCGCATTT CAGTAACCAG
TTTAAAAGTG CTACAGGACT TACGCCAAGC GCATTCCAAC GGATCATTGA CAAGCGTAAA
AGTGCGCTTC AAAACAAATA A
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| Protein sequence | MKLYLKFDIN TICKKVLQEQ LETLNLNYSV LGFGEVEINN DPSAETIKKL NQNLNDYGIS
VVESHKSVLV QKIKDAIVEM VYSEEKLSNS KTSAYLADKI GQSYGYISNL FSDVTYTSIA
NFIILQKIER AKQLILTNEL TITEIAWKLN YSSVAHFSNQ FKSATGLTPS AFQRIIDKRK
SALQNK
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