| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3459 |
|---|
| Symbol | |
|---|
| ID | 4186037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 4004106 |
|---|
| End bp | 4005023 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638073447 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_680036 |
|---|
| Protein GI | 110639826 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0353922 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAAG AAGAAAACAA GAAAAGTAAT AATTTAATTT TTATCCTTAT TATCCTGGCG
TTGTTGGGTG TAATCGGATA CCTGTTGTTT AACAACAACC AGAAGTCAAC TACCATTGAA
GAGCAGGAAA AAACAATCAT TTTAAAAGAT GATTCATTAG CTAATAAAGT TGCTGAATTA
GAAGGCTTGC AGTTACAATA CCATAGCTTA CAGGCACAAG CTGCGCAGTT AGGCCAGTCA
AATGATTCAT TAGCTGCTAA AATTGCTGAA CTGGACAATG CAATTGCAAG TTTGAAAAAA
GGTAACGCTG TAAACATGAA TAAGCTGAAT GCACAGATCG CATCTTACAA GAAAGATCTT
GAAGCTAAAG AAGCAGAAAT CATGCAGTTA AGAGAAGAGA ACAAAAACTT AAATTCTTCT
ATTGATACCT TAAAGCAGGA TAAAGTAGTA ATGAATGATT CAATCAATAA TCTTCGTTCT
GTTCGTTCTG ACTTACAGCA GAAATATGAA TTAGCTTCTA TCTTAAAAGC TGAAAATTTA
AAAGCTACTG TAATCAATGC AAAAGGTAAA GAACTTGTTG ATGATGAGTA CAAAGCTAAA
AACATTGATA AAGTTAAAAT CACATTTACA TTAGCAGATA ATAAAGTAGC TCCAAAAAAC
AAAAAGACTA TCTACTTACA GGTGATCGAA CCAAGCGGTG CTCCATTATT TGACAGTGCA
TTGGGCGGCG GTTTCTTCAA AACTTCAGAA GGAAAAGAAA TTCCGTTCAC TGAAAAACAA
TCTGTTGATT TCAACAACAC AAACCAAGGT GTAACATTTG TTTACTCGAA AGGTTCTGAG
TTTAAAGTTG GTTCATACAC GATCAAAATC TGGCAGGACG GTAACCTTAT CGGTACAACA
TCTTTAGCTG TTAAATAA
|
|---|
| Protein sequence | MAQEENKKSN NLIFILIILA LLGVIGYLLF NNNQKSTTIE EQEKTIILKD DSLANKVAEL
EGLQLQYHSL QAQAAQLGQS NDSLAAKIAE LDNAIASLKK GNAVNMNKLN AQIASYKKDL
EAKEAEIMQL REENKNLNSS IDTLKQDKVV MNDSINNLRS VRSDLQQKYE LASILKAENL
KATVINAKGK ELVDDEYKAK NIDKVKITFT LADNKVAPKN KKTIYLQVIE PSGAPLFDSA
LGGGFFKTSE GKEIPFTEKQ SVDFNNTNQG VTFVYSKGSE FKVGSYTIKI WQDGNLIGTT
SLAVK
|
|---|
| |