| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3446 |
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| Symbol | |
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| ID | 4185378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 3960228 |
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| End bp | 3961697 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638073434 |
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| Product | phytoene dehydrogenase |
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| Protein accession | YP_680023 |
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| Protein GI | 110639813 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02733] C-3',4' desaturase CrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.503543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATGATA TAGCCATTAT TGGAGGAGGA ATATCAGGAT TTGCTACTGC TTTAAGACTA
CAAAATAAAG GTTTTAAAAC AATTGTTTTT GAATCACATG GGCAATTAGG TGGATGTGCT
GGCTTTTTTA GTGAAAAAGG TTTTTCATTT GATGTAGGGG CAACTACTTT AGTTGATTTT
AGTAAAGGGG GAATTGGAGG TGATTTTTTT GAAGAGCTTA ATTTTTCTTT ACCTGAGGGG
GAATATATTG ATTATGTGTT ATGGCTTCCG GATCGAAAAG TAACATTATA TAGAGATGCT
ATTAAATGGA ATAAAGAACG GTTAGAAAAA ATCGGAACCA CTAAAAATCA CATAGAATTT
TGGAATCTTA TTGATAAAAC AACTGAAGTC TTTTGGAGGG CTGCAAGAAA GAATATTCGT
CTACCAATAA AAAACCTGAA TGATATTATT TATGCTTTTA GAGTAATTGG TGCAAAAAAT
ATTTATTTAT TGAAATATCA AAATTACACG ATGCTTGATA TTTTAAAAAA ATTTAAACTT
GAAAATGATA AAGCCTTAAA GGGATTACTT TCAGTTCTTA TTGAGGATAC AGTTAATAGT
ACAATAGATA AAGCACCTTT CATTAATGCT TCTTTAGGTT GTTCAATAAG AGGTGCTGGA
TTAATGAGAG CAACAGGAGG AATGAAAGGG TTTTGGAATT ATCTTTCAAA AATTTACTTA
AGCAAAGATG GTGTAATTAA AAAAGCGCAT AAAGTTTTAA GTCTATCAAA AGATCGTTCT
GTCTGGACAA TTAATACATC TAAAGGTTCC TTCTATGCAA AAAAAATAGT TAGCTCCTTA
CCAATTGATT TAACATACAA CATCGCTCCT ATCCATATAA AAAAAATATT AAATAAATAT
ATGTTTCACA ATAAAGAAGC TACAGGAGGG GCAATCGTCA TTTTTTTAGG AGTGCCGGAA
TCTAATTTAG AAAATGAAAT ATTAACGCAT CATCAAATTT TACTCAATTA CGATTCACCA
TTAGGAAATG GAAATAATAT GTTTATTTCC ATTTCCTCAA AGGATGATAC TTTGTCTGCC
CCTCTTGGAT ATCGTTCTGT AATGATTTCT ACCCATTGTG ATATTAATGA ATGGAAAAAT
TTATCTGAAC ATCAGTATCA GCTTAAAAAA GAAGAAATTG GCAAAAGATT ATTAGGTTAT
GCTAAACGGG TCTATCCAAA TTTAGTAGAT AATGGAATCA TCTATAAAAT AGGTAGTCCA
CTAACTTATC AGAAGTTTAC AAATAGAGTG AACGGAAGTG TTGGTGGTTT TAAACAAACA
TTAGAAAATT CGAATTTCAA CTCTATTCCT CAAAATATAG GAGAAAAAGA TTTATGGATT
GTTGGCGATA ATACCTGGCC CGGACTTGGG ACAGTTGCCG GACTTATTGG AAGTAAAATT
GTATCGAAAC ATATACTTGA AACTTTTTAA
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| Protein sequence | MYDIAIIGGG ISGFATALRL QNKGFKTIVF ESHGQLGGCA GFFSEKGFSF DVGATTLVDF
SKGGIGGDFF EELNFSLPEG EYIDYVLWLP DRKVTLYRDA IKWNKERLEK IGTTKNHIEF
WNLIDKTTEV FWRAARKNIR LPIKNLNDII YAFRVIGAKN IYLLKYQNYT MLDILKKFKL
ENDKALKGLL SVLIEDTVNS TIDKAPFINA SLGCSIRGAG LMRATGGMKG FWNYLSKIYL
SKDGVIKKAH KVLSLSKDRS VWTINTSKGS FYAKKIVSSL PIDLTYNIAP IHIKKILNKY
MFHNKEATGG AIVIFLGVPE SNLENEILTH HQILLNYDSP LGNGNNMFIS ISSKDDTLSA
PLGYRSVMIS THCDINEWKN LSEHQYQLKK EEIGKRLLGY AKRVYPNLVD NGIIYKIGSP
LTYQKFTNRV NGSVGGFKQT LENSNFNSIP QNIGEKDLWI VGDNTWPGLG TVAGLIGSKI
VSKHILETF
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