Gene CHU_3420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3420 
Symbol 
ID4186293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3898795 
End bp3899298 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content39% 
IMG OID638073410 
Producthypothetical protein 
Protein accessionYP_679999 
Protein GI110639789 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC AGGAGTTAGA AATAAAAACA TACGTATCTG ATTTATTACA GGAAAGAGCG 
GAGCTTTTTC TGGTGGATAT CGCTTTTTCA GGCACCCATT CAAGAAGAAA GATTCTGGTT
ATTCTGGATA AAGATAGCGG TATTCTGATT GATGAATGCG GTGAATTCAG TCGCGCATTG
GGAAACCTGA TTGAAGAAAA CAACCTGTTT GGTGATAATG CTTATGTATT AGAGGTTTCA
TCGCCGGGCA TGGACAGACC GCTGCTTGTT TCAAGACAAT ACAAAAGAAG AATCGGCAAT
ACGCTGAGTT TTCTGTTAAA CGACGGAACC CAATTCGATG CTGTTCTTGA GAGCGTATCA
GAAGAAGGTG TAGTTGTAAT GCCGGCTCCG CAGAAAGTAA AAAAGAGTAA TAAAAAAGAA
GCTGTTGTTG ACGTGGCTAT TGAGCCTAGA AAACTACGTT TCGAGGAAAT AAAAAAGTGT
AACTTAATTG TATCGTTTAA ATAA
 
Protein sequence
MSKQELEIKT YVSDLLQERA ELFLVDIAFS GTHSRRKILV ILDKDSGILI DECGEFSRAL 
GNLIEENNLF GDNAYVLEVS SPGMDRPLLV SRQYKRRIGN TLSFLLNDGT QFDAVLESVS
EEGVVVMPAP QKVKKSNKKE AVVDVAIEPR KLRFEEIKKC NLIVSFK