Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3239 |
Symbol | |
ID | 4184335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3697460 |
End bp | 3698743 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638073232 |
Product | zinc protease |
Protein accession | YP_679822 |
Protein GI | 110639612 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00842119 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACACA TACTAGACAG GACGGTTGCT CCTGCAATAA ACCCAATTGA CCGTTTCCAC TTACCAAAAG TGGAAACGGT TTCGTTTTCT AACGGAAACA AGCTGCATAC ATTTGCCTTA GGTACACAAC CTGTTGTGCG TGTTGAATGG ATATTTAATA CGGGCAGCCG TGTGGAAGAA AAAACAGGTA CTTCTTTTTT CACATCAAAA ATGTTAGCAG AAGGCACAAG CGCGCTAACA TCTCCTCAAA TACAGGAATT TCTGGCTCAG TTTGGTGCTT TTCTTGAAGT TAATCCCGGA AACGAACGCA TCAACATTAC GTTATTCAGC TTAGAAAAAC ATTTAGCTGT ATTAATTCCG TTCATTAAAA ATCTGTTAAC CGATAGTATC TTCCCCGAAG AGCAGTTAAC AAAAATGAAA CAGATACAAT CTCAAGGCAT ACAGGTAAAC CTTGAAAAGA CAGCGTATGT GGCGGGTGTT GCTTTCAGAG AATTATTGTT CAACAACAAT CACCCGTATG GCAAACATTT AAATTTAGAA GTTATTGATG CCATTAAAAA AGAAGATCTG ATCCGCTTTT TTAAGGAAGA GCTTTTAAAT AAAACATGTG ACATTATTAT AACAGGTGGT TTCAGCGCAG AAAGCATATC TCTACTTGAG CAGCAATTCG GTAAGGATAG CGTAGTTGGC TGTAATACAA AAAAACCGTT ACCGAGCCTG TTAAAACCAA CAAGAGAAAT TGTTTTGGAG AAAGAAGGAA GCGTACAGTC TTCTGTACGC TACGGACGCA TGTTATTCAA TCATTCTCAT GCAGATTACT TTGATGCCTA TATTTTAAAT GAAATATTAG GCGGTTATTT CGGTTCACGT CTGATGCAGA ATATCCGCGA AGAGAAAGGT TACACCTATG GCATTCATTC AAGCATAGTA CCTATGCAGG AAGACGGATA CTTTGTAATT GGCACAGATG TCAAAAGAGA ATTTACCAAG AATACAATTG AAGAAATTGA AAAAGAACTT CAGCTGTTAA TCGATGTACC TGTTTCTGAT AATGAATTGG AAACAGTGAA AAATTATATG CTTGGTAGTT TTGTAGGTGA TATTCAAACA CCGTTTTCTA TCGCGGATAA ATACAAAACG ATTTATTTTA ACGGATTGGG TGATGATTAT TATGACCGCT TCTTTGCACG GATACAATCT ATAACAGCAG CCGATATTCA GGCGGTAGCA AAAAAGTACT TCACGCCGGC AGAAATGTCT TACGTAATTT CAGGTGGTTT TTAA
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Protein sequence | MTHILDRTVA PAINPIDRFH LPKVETVSFS NGNKLHTFAL GTQPVVRVEW IFNTGSRVEE KTGTSFFTSK MLAEGTSALT SPQIQEFLAQ FGAFLEVNPG NERINITLFS LEKHLAVLIP FIKNLLTDSI FPEEQLTKMK QIQSQGIQVN LEKTAYVAGV AFRELLFNNN HPYGKHLNLE VIDAIKKEDL IRFFKEELLN KTCDIIITGG FSAESISLLE QQFGKDSVVG CNTKKPLPSL LKPTREIVLE KEGSVQSSVR YGRMLFNHSH ADYFDAYILN EILGGYFGSR LMQNIREEKG YTYGIHSSIV PMQEDGYFVI GTDVKREFTK NTIEEIEKEL QLLIDVPVSD NELETVKNYM LGSFVGDIQT PFSIADKYKT IYFNGLGDDY YDRFFARIQS ITAADIQAVA KKYFTPAEMS YVISGGF
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