Gene CHU_2940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2940 
Symbol 
ID4185581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3361946 
End bp3363091 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content38% 
IMG OID638072927 
Producthypothetical protein 
Protein accessionYP_679524 
Protein GI110639315 
COG category[S] Function unknown 
COG ID[COG4804] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0285296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCACA TTACGGACAT AGCGTACAAA AACTGGATTG TTGAACTGAA ATCAAAAATC 
CGTTCGTCTC AGGTTAAGGC ATCTTTGGCG ATTAATGCTG CTTTGATTGA ATTTTATTGG
GATCTGGGCA AAATGATTGC TGAAAAGCAG ACTGCCTGGG GAACAAAATT TATTGAGCAG
GTTTCTCATG ATTTGCAGGT TGAATTTCCA GAAATGAAAG GGCTTTCAAC CACTAATCTT
AAATATTGCC GTAGTTTCTA CTTATTTTAT CAAAATGCAA TTGGTCAACA AGCTGTTGCC
CAATTGCCAG TTACTCCAAA TGTTCAACAA GGTGTTGGAG AAATAAGTCA ACAATCTGTT
GACCAATTAC AACATATTGA AAAACAGGTA AATGTATTTG GGCAACAGTT TGTTGCACAA
ATACCCTGGG GGCATAACAT ACTGATTTTT ACCAAATCAA AAAGTTATAC AGAAGCCCAG
TTTTATCTTC AGCAAACGAT TAGCAATGCC TGGGGACGCG AAACCTTGGC GTTGCAGATA
AAATCTCAGT TGTTTGAAAG GCAAGGGAAA GCTATAACCA ATTTTAAACA GACGCTGCCA
GAGCCTTTGT CTGATCTAGC GCAGCAGACG CTTAAAGATC CCTACAATTT TGATTTCGTG
AATATGGCCG GTACCATGAA GGAAAAGGAT TTGGAGAAAC AATTGATTAC ACACATCTCT
AAATTTTTGC TGGAGTTGGG GAAAGGTTTT GCTTTTGTAG GCCAGCAATA CCATCTGGAA
ATAGCAGAGA ACGATTACTA TTTGGATTTG CTTTTTTACC ACATCAAACT GAAATGTTAT
GTGGTGATTG AATTGAAGAA CACCAAGTTT GTGCCGGAAT ACACAGGCAA AATGAATTTT
TATTTATCTG CTGTAGATAC CTTGTTGAAG CAAGACGACG ATAAACCAAC CATAGGTATT
TTGTTGTGTC GCGATAAAAA CAACATTGAA GCAGAGTTTG CCTTGCGCGA CATCAACAAA
CCTATAGGTA TAAGTGAATT TAGTTTTACC GAAATACTCC CCGAAAATCT TAAAAGCAGT
TTGCCCACCG TTGAAGAACT GGAAAATGAA TTGCAACATC TAACAAACGA TACCGATGAA
AACTAA
 
Protein sequence
MSHITDIAYK NWIVELKSKI RSSQVKASLA INAALIEFYW DLGKMIAEKQ TAWGTKFIEQ 
VSHDLQVEFP EMKGLSTTNL KYCRSFYLFY QNAIGQQAVA QLPVTPNVQQ GVGEISQQSV
DQLQHIEKQV NVFGQQFVAQ IPWGHNILIF TKSKSYTEAQ FYLQQTISNA WGRETLALQI
KSQLFERQGK AITNFKQTLP EPLSDLAQQT LKDPYNFDFV NMAGTMKEKD LEKQLITHIS
KFLLELGKGF AFVGQQYHLE IAENDYYLDL LFYHIKLKCY VVIELKNTKF VPEYTGKMNF
YLSAVDTLLK QDDDKPTIGI LLCRDKNNIE AEFALRDINK PIGISEFSFT EILPENLKSS
LPTVEELENE LQHLTNDTDE N