Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2940 |
Symbol | |
ID | 4185581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3361946 |
End bp | 3363091 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638072927 |
Product | hypothetical protein |
Protein accession | YP_679524 |
Protein GI | 110639315 |
COG category | [S] Function unknown |
COG ID | [COG4804] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0285296 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCACA TTACGGACAT AGCGTACAAA AACTGGATTG TTGAACTGAA ATCAAAAATC CGTTCGTCTC AGGTTAAGGC ATCTTTGGCG ATTAATGCTG CTTTGATTGA ATTTTATTGG GATCTGGGCA AAATGATTGC TGAAAAGCAG ACTGCCTGGG GAACAAAATT TATTGAGCAG GTTTCTCATG ATTTGCAGGT TGAATTTCCA GAAATGAAAG GGCTTTCAAC CACTAATCTT AAATATTGCC GTAGTTTCTA CTTATTTTAT CAAAATGCAA TTGGTCAACA AGCTGTTGCC CAATTGCCAG TTACTCCAAA TGTTCAACAA GGTGTTGGAG AAATAAGTCA ACAATCTGTT GACCAATTAC AACATATTGA AAAACAGGTA AATGTATTTG GGCAACAGTT TGTTGCACAA ATACCCTGGG GGCATAACAT ACTGATTTTT ACCAAATCAA AAAGTTATAC AGAAGCCCAG TTTTATCTTC AGCAAACGAT TAGCAATGCC TGGGGACGCG AAACCTTGGC GTTGCAGATA AAATCTCAGT TGTTTGAAAG GCAAGGGAAA GCTATAACCA ATTTTAAACA GACGCTGCCA GAGCCTTTGT CTGATCTAGC GCAGCAGACG CTTAAAGATC CCTACAATTT TGATTTCGTG AATATGGCCG GTACCATGAA GGAAAAGGAT TTGGAGAAAC AATTGATTAC ACACATCTCT AAATTTTTGC TGGAGTTGGG GAAAGGTTTT GCTTTTGTAG GCCAGCAATA CCATCTGGAA ATAGCAGAGA ACGATTACTA TTTGGATTTG CTTTTTTACC ACATCAAACT GAAATGTTAT GTGGTGATTG AATTGAAGAA CACCAAGTTT GTGCCGGAAT ACACAGGCAA AATGAATTTT TATTTATCTG CTGTAGATAC CTTGTTGAAG CAAGACGACG ATAAACCAAC CATAGGTATT TTGTTGTGTC GCGATAAAAA CAACATTGAA GCAGAGTTTG CCTTGCGCGA CATCAACAAA CCTATAGGTA TAAGTGAATT TAGTTTTACC GAAATACTCC CCGAAAATCT TAAAAGCAGT TTGCCCACCG TTGAAGAACT GGAAAATGAA TTGCAACATC TAACAAACGA TACCGATGAA AACTAA
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Protein sequence | MSHITDIAYK NWIVELKSKI RSSQVKASLA INAALIEFYW DLGKMIAEKQ TAWGTKFIEQ VSHDLQVEFP EMKGLSTTNL KYCRSFYLFY QNAIGQQAVA QLPVTPNVQQ GVGEISQQSV DQLQHIEKQV NVFGQQFVAQ IPWGHNILIF TKSKSYTEAQ FYLQQTISNA WGRETLALQI KSQLFERQGK AITNFKQTLP EPLSDLAQQT LKDPYNFDFV NMAGTMKEKD LEKQLITHIS KFLLELGKGF AFVGQQYHLE IAENDYYLDL LFYHIKLKCY VVIELKNTKF VPEYTGKMNF YLSAVDTLLK QDDDKPTIGI LLCRDKNNIE AEFALRDINK PIGISEFSFT EILPENLKSS LPTVEELENE LQHLTNDTDE N
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