Gene CHU_2938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2938 
Symbol 
ID4185579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3359157 
End bp3360656 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content30% 
IMG OID638072925 
Producthypothetical protein 
Protein accessionYP_679522 
Protein GI110639313 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0338123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACTG GTCTATTATT AACATTATTA AATAAAACAA CATCACTTTC AGTTAATCAA 
AAGACTGGTA TTGAAGTTGT AAGCTGTACC TTTAATGATT TAATAAATAC CTTTCAAAAA
GCTATTCCCA ATACTAATAT AAAAGGTCAG TTATGTATAC CAGAATATCA ACGACCATAT
GTCTGGAAAG AAAAACAGAT CAATCGGCTT TTAGATGATT TTATTGAATA TTATAAAAAT
ACGGATAATG ACAAACCACT TTTTTATTTA GGTAGCATAA TAGTACATAA GGATGAAGGC
ACACTTAAAA TCATTGACGG ACAGCAACGA ATAACAACAT TATTGCTCAT CAATTCTATT
ATCAATAAAG AAATTAAAAG TGGGATTCAA TATACTTCTA CTACCAGCAT CAATAATATA
AAACGCAATT TTTCTTACCT TAAAAGTGTA CACGCAAAAG ATGTTTTTGA TTATGCCGAT
ACAGAAGTCC TCAACTATAT TGATTTTGAT AAAATTAATG TAACGTTGGT AGTTACTGCT
ACCGAAGATT TAGCCTATAC TTTTTTTGAA ACTCAGAATA CAGGAGGTGT TCGATTGAGT
GGTTCTGATA TAATAAAGGC ACATCATTTA CGAGCCATTT CTTCTGAAAA AAATATAAAT
TATCAGGCCC GAAAATGGGA AGGCATCGAA AGTGAAAAAA TAGAAAGTAT CATTCAAAAT
CTTACTAAAA TAAGATTTTG GGATAACAGA AATTGGCGCA GGTTCCCTTT TTACAGAGAT
GAAAAAGGAA TAAAGGAAGT CTTAATTGAA GAATTTACTG AAAATACAAA ACACGACAAG
GAAGATATTT CATTTTATTA TAGTGCTGTA AAAATGGAGG CTGGCAGGGC ATTTCAAATG
CATGAAAGCA ACTATAAGCA ACTAAAGCAA CCTTTGTCGG ATGGTAATAA TACTCTTGAT
TATATCAATG ATTATGTGCA CTTACACGAT GTACTATTCA ATAGAAGCAA AAAAGATTAC
AGAGTAAGCG ATGCTTTTTA TGATTTTAAC GAAAAGTTGA TGCATGGCAA TTCGGGCACA
TTGTTCTTAA AAGAGTTGTT AGAAATTTGC ATTATCACTT ATGTAAGCCG TTTTGGATTT
TACCGCTTAT TTGAAGCCAG TTTATGGTTA TATCGTTCTA TTTATTCGCT AAGGGTTTCT
TCAAGTAGAA ACGTTAGAGA GGATAGCATT TTCAAATTCG TTTTTGAAAA TCAATTTATT
GATAATATCA TTGAAGTTTA TACAGTAGAT GAACTCATTT TATATCTAAA AAGATTTAAG
TACACCTTTA ATACTGACAA TTTAGGAGTG AAAGAATCAA AAGATAAGCA CATTGGTTCA
TTGAATAATT ATTTTAATGA GTTTGGTAAA ACAGAAGATT TCAAGAAAAC TCCAAAAGCT
TTTGACAAAG CTTTTTTAAC TGCCATTGTA ACTAAAATTA AAGAAAACAA TGAGCAATAA
 
Protein sequence
METGLLLTLL NKTTSLSVNQ KTGIEVVSCT FNDLINTFQK AIPNTNIKGQ LCIPEYQRPY 
VWKEKQINRL LDDFIEYYKN TDNDKPLFYL GSIIVHKDEG TLKIIDGQQR ITTLLLINSI
INKEIKSGIQ YTSTTSINNI KRNFSYLKSV HAKDVFDYAD TEVLNYIDFD KINVTLVVTA
TEDLAYTFFE TQNTGGVRLS GSDIIKAHHL RAISSEKNIN YQARKWEGIE SEKIESIIQN
LTKIRFWDNR NWRRFPFYRD EKGIKEVLIE EFTENTKHDK EDISFYYSAV KMEAGRAFQM
HESNYKQLKQ PLSDGNNTLD YINDYVHLHD VLFNRSKKDY RVSDAFYDFN EKLMHGNSGT
LFLKELLEIC IITYVSRFGF YRLFEASLWL YRSIYSLRVS SSRNVREDSI FKFVFENQFI
DNIIEVYTVD ELILYLKRFK YTFNTDNLGV KESKDKHIGS LNNYFNEFGK TEDFKKTPKA
FDKAFLTAIV TKIKENNEQ