| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2882 |
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| Symbol | yccZ |
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| ID | 4184473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 3295473 |
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| End bp | 3296216 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638072872 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_679471 |
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| Protein GI | 110639262 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000309988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0604046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACGT ACTTCATCTA TCTGTATATA GTCGTTGTTG TACCTATGGT AACTTCTTGT
GCAACGCAAA ATCTTTTTCA AAGTGATAAG CATTCAAATT TTATAAGTGA TTCAATACCT
TCTTCAAGAG TTGAACATAT CTTAAAACAG GATGATAAAA TTACCATCAG CATATGGAAT
CATGATGATT TAAGTGTGGG TTCCTTATTT GGAGTATATA ATTCAAATGA AGTATATGGA
AAATGGATCA TTATTGATCA GAATGGTGAA GTAGATCTGC CTCAAATAGG CAAAGTAAAG
TTAGATGGAT TAACAATAAA AAATGCTGAA GATTCTTTAC GCGCCAGGTA TGCAAAGTTA
ATTGTAGACC CTGTAATCGT ATTGAAAGTT GTCAATATGG AAATTACTGT TTTGGGTGAA
GTATTTAAGC CTGGTACGTA TACCATAGAT AAAGATTTTA ATACGGTAAT AGAACTTTTA
GGCAAAGCCG GAGGACTGGA TTTCTATGCA AATAAAAAAC AAATACATGT AATACGAGGC
GAAGGACCAA CTGCAAAAAA GTTTGTGCTG AATTTAACCA GTATGGAAGA ATACAAACAA
AATAATTTAG TATTAGAATC TGGTGATGTA ATATTTGTAC CAATGCGAAA AGGAAAAATG
ATTGATAAAA AAGCACCAAT CATTATTCCA TTTGCAAGTG CGCTGACCGC AACATTAGTA
CTAATATCAT TTTTAACAAG ATAA
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| Protein sequence | MKTYFIYLYI VVVVPMVTSC ATQNLFQSDK HSNFISDSIP SSRVEHILKQ DDKITISIWN
HDDLSVGSLF GVYNSNEVYG KWIIIDQNGE VDLPQIGKVK LDGLTIKNAE DSLRARYAKL
IVDPVIVLKV VNMEITVLGE VFKPGTYTID KDFNTVIELL GKAGGLDFYA NKKQIHVIRG
EGPTAKKFVL NLTSMEEYKQ NNLVLESGDV IFVPMRKGKM IDKKAPIIIP FASALTATLV
LISFLTR
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