Gene CHU_2818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2818 
Symbol 
ID4184182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3215266 
End bp3216444 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content36% 
IMG OID638072809 
Producthypothetical protein 
Protein accessionYP_679408 
Protein GI110639199 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.587259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTT TTTGTACCTT TCTTACACTG TTATTCTTTT TTTTAGCAAC AGATTTATCT 
GCACAAACAT ATACTTATTC TACTAAATGG GGAGGAACAG GTTCTGCTGC AGGGAAATTT
GATGATATTG GTGCCCTGGA TGTTGATGCA GACGGAAATG TATATGTTGC AGATTGGCGA
AATTTCAGAA TTCAAAAATT TTCAAATACA GGTACATACA TTACCTCTTG GGGAACGGAG
GGCACAGGTG ATAATCAGTT TAAAAGGGTT AACAATCTTT GTGTAGATAA TGATGGCAAT
ATTTTAGTTT CTGATGCGGG CGCAAGCGTA GTAAAAAAAT ACACAAATAC AGGTGTGTTC
ATAAGCAAAT TTGGATCTTC CGGAAAACAA GAAGGGCAAT TCAATGAGAA CCAGGGAATG
TTTGTTGATG CTGATAATAA TATCTTTGTA TGTGATGTAA ATAATTTCAG AGTTCAAAAA
TTCTCCAGTA ATGGTACGTT TTTATTGAAG TGGGGAAGTT ATGGAACTGG TGCCGGTTCT
TTTAATGGCA ACTTTGATTT AACAATTGAT GCAAGCGGAA ATGTTTATGT TGCAGATGTA
AACAACAACC GAATTCAAAA GTTTACGAAT ACGGGTGTTT ATATTAAAAC CATAGGAGGA
TTAGGAACTA CAGAAGGTTT ATTCAAACAA CCAATTGCAA TTGATATTGA TGCTAATGGC
GATTTATATG TAGCAGAATT GGGAAATCGC AGGATACAAA AATTGACATC TGAAGGTGTT
TATATACAAT CATGGGGCTC ACAAGGGTCA GGAAATGGAC AGTTCTCATC TTTATATGGC
ATATGTGTAG ATAAGAACGG TTCTGTTTTT GTTTCCGATT CAGACAGAGA CAATGTTCAG
AAATTTGTTC CCGCTCTTTC AACAAGTGTT CAAAACACAA CACGTGTTGA ACAATATCTT
GCTTATCCCA ACCCTGCAAA AGAATCCATT CAATTAAAAA ATATTGAAGG AACAGCTGCA
CGTATTGAAT TTATTAATGC AGCGGGCAGC TTAATTAAAT CCATCGATCT GGCGGGAAAT
GAAAATACGA TACAGGTTGA AGACATGCCG CGTGGCATAT ACCTGCTGAA ATGCATTTCC
GATCAGAATA TCATTACACA ACGTATTGTA TTGCAATAA
 
Protein sequence
MKRFCTFLTL LFFFLATDLS AQTYTYSTKW GGTGSAAGKF DDIGALDVDA DGNVYVADWR 
NFRIQKFSNT GTYITSWGTE GTGDNQFKRV NNLCVDNDGN ILVSDAGASV VKKYTNTGVF
ISKFGSSGKQ EGQFNENQGM FVDADNNIFV CDVNNFRVQK FSSNGTFLLK WGSYGTGAGS
FNGNFDLTID ASGNVYVADV NNNRIQKFTN TGVYIKTIGG LGTTEGLFKQ PIAIDIDANG
DLYVAELGNR RIQKLTSEGV YIQSWGSQGS GNGQFSSLYG ICVDKNGSVF VSDSDRDNVQ
KFVPALSTSV QNTTRVEQYL AYPNPAKESI QLKNIEGTAA RIEFINAAGS LIKSIDLAGN
ENTIQVEDMP RGIYLLKCIS DQNIITQRIV LQ