| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2597 |
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| Symbol | priA |
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| ID | 4186141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2970763 |
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| End bp | 2973210 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638072589 |
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| Product | primosomal protein N'(replication factor Y)( helicase) |
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| Protein accession | YP_679192 |
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| Protein GI | 110638983 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.510107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTATTAC CCTTACCTCT TCCACAATTA TTTACATATA AAATACCCGA TCAGCTGGTA
GATACCGTTT CTGCAGGCTG CAGAATTATT GTGCCCTTTG GCCAGCGTAA GTTTGTGACC
GGTGTGGTAC GTTCCATTCA TCAGCATGCA CCTGCCAGTT ATCAGACCAA AGAATTAATT
GATGTATTGG ATGTTACGCC AACGATGAAT GCATATCAAT TTAAATTCAT GGATTGGATG
GCGGAATATT ACCTATGTGC ACCCGGCGAA GTACTTCAGG CGGCCTTACC CAGCGGATTT
AAATTGAGCA GTGAATCCAT GATTCAATTG AACCCACTGT TTCAGGAAGC GTCTGTGGAC
TTAACAGAAA AAGAACGCAG GATCATTCAG GAGTTGCGTT CCAATACATT AAGCTATAAA
GACATTTCAA AACTCATTGA CCAGTCAAGC GTTCAGCCAA TCATAAAATT ACTGATCCAA
AAACAAGCAA TCCTGTTATT TGAAGAAGTA AAAGAAAAAT ACAGTCCGAA GATAATATCC
AAAATACGTT TGGCCGATCA GTATACAACT CCGCATGCAC TGGCGAATTT GATGCAGGAG
CTGGATAAAA AGCCCAGACA GCAGGAAGTA CTGATGCGTT ATCTGCAGGA AGTACCGGTC
ATTCAGACTC CCGGCGCTAA CATACCAGGT ATTGAAAAAA CTTTTTTTAC TGCTTCCGGA
CTTTCTACTT CTTCGTTGCA GACACTTATT AAAAATAAAG TGTTTGAAGC GTTCGAAGAA
GTTATTTCCA GATTAAGTTA CCGTGCAGAC GAAAAAAAAT CTGTCGTAGA ATTATCCGAA
CAGCAGGAAG CTGCGAAAGA ATCTATCCTG CTTCAGTTAG ACACTAAAGA TAGTGTGCTG
CTGCACGGCG TAACCGGAAG CGGTAAAACA GAGATTTATA TTGACCTGAT CAAACGCAGC
ATTGATAATG GTTCACAAGC ATTGCTGCTG CTCCCTGAAA TTGCCTTAAC CACACAGATT
GTACAGCGGC TTGAAGAATA TTTCGGCGAC CGCATGGGCG TATATCATTC TAAATTTTCA
GACAACGAAC GTGTAGAAGT CTGGAGAGGA TTGCAGGAAG GCCGCTACGA TTTTATTGTT
GGTGTACGTT CTTCTGTTTT CCTTCCTTTC ACACATTTAG GCCTGATTAT TATTGATGAA
GAACATGAGG CTTCATACAA ACAACAGGAC CCTGCTCCGC GCTACAATGG CCGGGATGCA
GCGCTGATGC TTGCACGCAT TCACAATGCC AAAACCGTAT TGGGTTCTGC CACACCAAGC
ATAGAAAGCA GAGACGCAGC CTTAAAAAAC CGGTGGGGTT ATGTGCCTCT GCTGAACAGA
TATGGCAATG TATCATTGCC CGAGATCAGG CTGGCAGATA TGCGTGTTGA ACGCAAAAAT
AAAACTGTTC AGCAAGGTTT TTCGTTAACA CTTCTTTCAG CGATACGCGA AACCATAGCA
AATAAAAAAC AGGTTATTAT TTTTCAGAAC CGCCGCGGAT ATGCCCCGAT GCTGGAATGC
GAAGATTGCG GCAACATTCC GATGTGTACC AGCTGCTCAG TTAGTTTAAC CTATCACCAG
TTCAGCCATG AACTGCGTTG CCATTATTGC GGCTTTACCC GCAAGGTGCC TCAAAAGTGC
GACAGCTGCA GTTCGCATCG TTTAAAAACT GTAGGATCAG GTACTGAACG TATTGAAGAT
GAATTACAGA TACTTCTGCC AGAAGCCCGG ATCCGCCGCA TGGATCTTGA TACAACGCGC
AAAAAAAACA GCTTTGCCGA ATTGATCACA GCTTTCAGTC AGCACGAAAT TGATATATTG
ATAGGTACCC AAATGGTGAC AAAAGGATTG GATTTTGCCA ACGTTGAACT TGTGGGTGTG
TACGATGCGG ACCGCATGCT GTATTTTCCT GACTTCAGAG CCATTGAACG TACCTATCAG
ATGATTGTTC AGGTAAGCGG ACGGGCAGGA AGAAAAAGCG GCGAGGGGAA AGTTATTATC
CAGACAGCAC AACCCGAGCA CCCTGTCTTT GCGTTTATAA AGAATAATGA TTACGATGGT
TTCTTTACAC GGGAGCTTTA TGAGCGGGAA ATGTATCATT ATCCCCCATT CACCCGTGTA
ACACATATTT CTGTACTGCA TCTGGATAAA AAAGAAGCGT TAAAAACAGC ACATGGCTTA
ACGGCTAAAC TTAAAGATGC TATTGGCAGC AAACGGATTT TAGGTCCGCA AGTGGCGTCG
ATTGAAAAAT TAAGAAATTA TTATCATATC GAACTTTTCA TTAAATTAGA AAAAGACATT
AAAGGGTTGC AATCTATAAA AAATAAAATC GCCTCTATTG TTCAGAATGA ACATACTTTA
CACATTGGTT CTAAAGGCAG GATCATTATA GATACAGATC AAAATTAA
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| Protein sequence | MVLPLPLPQL FTYKIPDQLV DTVSAGCRII VPFGQRKFVT GVVRSIHQHA PASYQTKELI
DVLDVTPTMN AYQFKFMDWM AEYYLCAPGE VLQAALPSGF KLSSESMIQL NPLFQEASVD
LTEKERRIIQ ELRSNTLSYK DISKLIDQSS VQPIIKLLIQ KQAILLFEEV KEKYSPKIIS
KIRLADQYTT PHALANLMQE LDKKPRQQEV LMRYLQEVPV IQTPGANIPG IEKTFFTASG
LSTSSLQTLI KNKVFEAFEE VISRLSYRAD EKKSVVELSE QQEAAKESIL LQLDTKDSVL
LHGVTGSGKT EIYIDLIKRS IDNGSQALLL LPEIALTTQI VQRLEEYFGD RMGVYHSKFS
DNERVEVWRG LQEGRYDFIV GVRSSVFLPF THLGLIIIDE EHEASYKQQD PAPRYNGRDA
ALMLARIHNA KTVLGSATPS IESRDAALKN RWGYVPLLNR YGNVSLPEIR LADMRVERKN
KTVQQGFSLT LLSAIRETIA NKKQVIIFQN RRGYAPMLEC EDCGNIPMCT SCSVSLTYHQ
FSHELRCHYC GFTRKVPQKC DSCSSHRLKT VGSGTERIED ELQILLPEAR IRRMDLDTTR
KKNSFAELIT AFSQHEIDIL IGTQMVTKGL DFANVELVGV YDADRMLYFP DFRAIERTYQ
MIVQVSGRAG RKSGEGKVII QTAQPEHPVF AFIKNNDYDG FFTRELYERE MYHYPPFTRV
THISVLHLDK KEALKTAHGL TAKLKDAIGS KRILGPQVAS IEKLRNYYHI ELFIKLEKDI
KGLQSIKNKI ASIVQNEHTL HIGSKGRIII DTDQN
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