Gene CHU_2596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2596 
Symbol 
ID4186140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2970247 
End bp2970702 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content38% 
IMG OID638072588 
Productleucine-rich repeat-containing protein 
Protein accessionYP_679191 
Protein GI110638982 
COG category[S] Function unknown 
COG ID[COG4886] Leucine-rich repeat (LRR) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TACTTTTTAT TGCAGCACTT GCCATTACTG GTATTCTATC AACAAGCATA 
TATGCTTCGG CACAGGTTTC CTATGATTCA CTTTGCCAAT CGTATAAAAC ATATTATTCA
ATCGCAGAAG CACTGAAAGA TCCGTTGAAC GTACAAAAGC TTGATTTATC AATGCAAAAA
TTAACCGTTT TTCCGGAAGA AATTATGCAG TTTCCAAATC TGGTTTGCCT CGATCTTTCA
TTCAACCGCA TTCCTACACT TCCTCCATCC TTTGCAACAT TAACAAAAAT CGAATACCTG
AATTTAGCAG GAACCCGGTA TATTGGCAAA CTGCCAAGTG TCTTAGCCAA CATGCAAAAT
TTGAAAGTGC TGGATCTGAG AGACCACCCG GAGTGGCCCG CTTCAACATT TGAAGAAGCA
AAAAAATTAT TACCAACGGT TACAATCCTT AAATAA
 
Protein sequence
MKKILFIAAL AITGILSTSI YASAQVSYDS LCQSYKTYYS IAEALKDPLN VQKLDLSMQK 
LTVFPEEIMQ FPNLVCLDLS FNRIPTLPPS FATLTKIEYL NLAGTRYIGK LPSVLANMQN
LKVLDLRDHP EWPASTFEEA KKLLPTVTIL K