Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2596 |
Symbol | |
ID | 4186140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2970247 |
End bp | 2970702 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638072588 |
Product | leucine-rich repeat-containing protein |
Protein accession | YP_679191 |
Protein GI | 110638982 |
COG category | [S] Function unknown |
COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TACTTTTTAT TGCAGCACTT GCCATTACTG GTATTCTATC AACAAGCATA TATGCTTCGG CACAGGTTTC CTATGATTCA CTTTGCCAAT CGTATAAAAC ATATTATTCA ATCGCAGAAG CACTGAAAGA TCCGTTGAAC GTACAAAAGC TTGATTTATC AATGCAAAAA TTAACCGTTT TTCCGGAAGA AATTATGCAG TTTCCAAATC TGGTTTGCCT CGATCTTTCA TTCAACCGCA TTCCTACACT TCCTCCATCC TTTGCAACAT TAACAAAAAT CGAATACCTG AATTTAGCAG GAACCCGGTA TATTGGCAAA CTGCCAAGTG TCTTAGCCAA CATGCAAAAT TTGAAAGTGC TGGATCTGAG AGACCACCCG GAGTGGCCCG CTTCAACATT TGAAGAAGCA AAAAAATTAT TACCAACGGT TACAATCCTT AAATAA
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Protein sequence | MKKILFIAAL AITGILSTSI YASAQVSYDS LCQSYKTYYS IAEALKDPLN VQKLDLSMQK LTVFPEEIMQ FPNLVCLDLS FNRIPTLPPS FATLTKIEYL NLAGTRYIGK LPSVLANMQN LKVLDLRDHP EWPASTFEEA KKLLPTVTIL K
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