| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2518 |
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| Symbol | rumA |
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| ID | 4187043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2895460 |
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| End bp | 2896899 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638072511 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_679114 |
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| Protein GI | 110638905 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGAAA GAGGTCAAAT ATTAGAATCT GTAGCGATTG AAGAATTAGG CGCAGAAGGT
AAATGTGTAA GCAGATACAA CAACATTGTT ATTTTTTCGG AAAGAACAGT TCCGGGAGAT
GTTGTAGATT TAAAAGTAAC ACATTTTAAA AAGAAGAAAT TCGGAGAAGC CAACGTTTAT
AAAATCATTA CACCATCGGA ACATCGTGTA GAAGCTAAAT GCCAGCACTT TGGATTATGC
GGAGGCTGTA AATTACAACA CATCGATTAC AGTACGCAAT TACATTTCAA ACAGAAACAG
GTAAAAGACA ACCTCGAACG GTTGGGTAAA ATTGAGATAC CGGAGATCAT GCCGATTGTA
GGTTCAGGCA AAACATATGA ATACCGTAAC AAGCTTGATT TTACCTTCTC TAACAAACGC
TGGCTGCTGG AAGAAGAAAT GAGCCTTGAA CATGATACTC TGTATGGATT AGGGTTTCAC
CTTCCGGGAA AATTTGACCG GGTGATTGAT ATTTCAACAT GCCACCTGCA GCCTGAACCC
TCTAATTCAA TCCGCCTGGA AGTAAAAGCA TATGCATTAA AACATGGACT AACCTTTTAT
AATGTCCGTG CACACGAAGG GTTGATGCGT AATCTGATCA TCCGTACCAC AAACACACAT
GAAGTTATGG TATTGGTGCA GTTTGGAGAA GATAACAAAC CAGCCATTCA GGGATTACTT
TCACATCTGA TCACTACATT CCCCCAGATC ACTTCGCTGG TATATTTTAT CAATACAAAA
AAGAATGATA CCTATTCCGA TCTGGATGTG CATGTCTTCC ACGGTCCTGG CTACATACAG
GAAGAAATGG AAGGATTGAT CTTCCGTGTC GGACCAAAAT CTTTTTACCA GACAAACTCT
GATCAGGCAT ACGAATTATA TAAAGTAACG CGCGACTTTG CCGGATTAAC GGGCAATGAA
GTGGTATACG ATTTATATAC CGGTACAGGA ACCATTGCAA ATTTTGTTGC AAAAAAAGCG
AAACAGGTTA TCGGCATTGA ATATGTTGCC GATGCAATCG AAGATGCAAA AGTAAATTCG
AAGATAAACA ACATCGATAA CACGTTGTTT TATGCGGGTG ACATGAAAGA TGTCTTAAAT
AAAGAATTCA TTGCGCAGCA TCAGCGCCCG GATGTGATCA TTACAGATCC GCCGAGAGCA
GGCATGCATG AAGACGTAAT CAATACCTTG TTATTTATCG GTGCCCCAAA AATTGTTTAT
GTAAGCTGTA ACCCGGCAAC ACAGGCGCGC GACTTATCGA TGCTTGATTC GGATTATGAA
GTAAGCAGGA TCCAGCCGGT AGATATGTTT CCGCATACAG CGCATGTGGA AAATGTTGTG
CTGCTGACAA AAAGAGCGGT TAAAAAAATT ATCCAGAAGC CTGTTAGTGA GCCGGCATAA
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| Protein sequence | MLERGQILES VAIEELGAEG KCVSRYNNIV IFSERTVPGD VVDLKVTHFK KKKFGEANVY
KIITPSEHRV EAKCQHFGLC GGCKLQHIDY STQLHFKQKQ VKDNLERLGK IEIPEIMPIV
GSGKTYEYRN KLDFTFSNKR WLLEEEMSLE HDTLYGLGFH LPGKFDRVID ISTCHLQPEP
SNSIRLEVKA YALKHGLTFY NVRAHEGLMR NLIIRTTNTH EVMVLVQFGE DNKPAIQGLL
SHLITTFPQI TSLVYFINTK KNDTYSDLDV HVFHGPGYIQ EEMEGLIFRV GPKSFYQTNS
DQAYELYKVT RDFAGLTGNE VVYDLYTGTG TIANFVAKKA KQVIGIEYVA DAIEDAKVNS
KINNIDNTLF YAGDMKDVLN KEFIAQHQRP DVIITDPPRA GMHEDVINTL LFIGAPKIVY
VSCNPATQAR DLSMLDSDYE VSRIQPVDMF PHTAHVENVV LLTKRAVKKI IQKPVSEPA
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