Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2346 |
Symbol | cspB |
ID | 4185136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2708899 |
End bp | 2709090 |
Gene Length | 192 bp |
Protein Length | 63 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638072343 |
Product | cold-shock DNA-binding protein family protein |
Protein accession | YP_678946 |
Protein GI | 110638737 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.801075 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAACG GAACAGTTAA ATTCTTTAAT AACTCAAAAG GTTTTGGGTT TATTATCGAA AAAGAATCAG GAAAAGAATA TTTTGTACAC GTTTCAGGTC TTGTTGACGA GATCAGAGAA AATGACGAAG TTACTTTCGA ACTTGAAAAA GGAAAAAAAG GACTAAATGC AGTAAATGTT AAACTAGTTT AG
|
Protein sequence | MNNGTVKFFN NSKGFGFIIE KESGKEYFVH VSGLVDEIRE NDEVTFELEK GKKGLNAVNV KLV
|
| |