Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2200 |
Symbol | |
ID | 4184164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2558065 |
End bp | 2558736 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638072201 |
Product | hypothetical protein |
Protein accession | YP_678805 |
Protein GI | 110638596 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.911586 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.909176 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACTA CTAAAAAGAC CGTGTACTTA TGCTTAGCGC TGTTAGTACC GGTCTTTTTA ATTTTTCTAT TTACCTTTTT CGCACGTACA CAACACACAT TGCCTGTATA CTTTGCATAT GATTCAACAG AAACAGAACG CGGCTACATT ATTACAGACG CGCACCGAAT TCCAGCTTAT ACATTAACAG ATCAGAATGG TGATGCTTTT AAGAGCACAG CATATGATTC CAGTTTTAAG GTTTACGACT TTGTATTTAC ACGTTGCGGC AGCATCTGTC CGGAAATGAC CACTCAGATG ATCCGCGTTC AGGAAGCATT TAAGCATGAT AAAGATGTGG TACTTATTTC ATTAACCGTA GACCCGGAAC ATGATTCTTC TGAAGTACTT CAGCGCTATG CAAAACAGTA TAATGCTATT CCCGGCAAAT GGTATTTCCT GACCGGAGAA AAGGATACGA TCTATACCTT GGGGCAGAGA CAGTTCTTTT TGACTGCAAA GCAAAACGAA GAAGATCTGA CAGACTTTCT GCATAGCGAA CGTATTGTAT TGGTAGATAA AAACGGATGG ATCAGAGGCT ACTATACAGG CACCAATGAG AAAGATGTAG ACAGACTGAT TACAGAACTT AAAGTATTAC AAAAAATAGA GCGTGATGCA AAACGAAAAT AA
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Protein sequence | MNTTKKTVYL CLALLVPVFL IFLFTFFART QHTLPVYFAY DSTETERGYI ITDAHRIPAY TLTDQNGDAF KSTAYDSSFK VYDFVFTRCG SICPEMTTQM IRVQEAFKHD KDVVLISLTV DPEHDSSEVL QRYAKQYNAI PGKWYFLTGE KDTIYTLGQR QFFLTAKQNE EDLTDFLHSE RIVLVDKNGW IRGYYTGTNE KDVDRLITEL KVLQKIERDA KRK
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