Gene CHU_2200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2200 
Symbol 
ID4184164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2558065 
End bp2558736 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content39% 
IMG OID638072201 
Producthypothetical protein 
Protein accessionYP_678805 
Protein GI110638596 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.911586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.909176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTA CTAAAAAGAC CGTGTACTTA TGCTTAGCGC TGTTAGTACC GGTCTTTTTA 
ATTTTTCTAT TTACCTTTTT CGCACGTACA CAACACACAT TGCCTGTATA CTTTGCATAT
GATTCAACAG AAACAGAACG CGGCTACATT ATTACAGACG CGCACCGAAT TCCAGCTTAT
ACATTAACAG ATCAGAATGG TGATGCTTTT AAGAGCACAG CATATGATTC CAGTTTTAAG
GTTTACGACT TTGTATTTAC ACGTTGCGGC AGCATCTGTC CGGAAATGAC CACTCAGATG
ATCCGCGTTC AGGAAGCATT TAAGCATGAT AAAGATGTGG TACTTATTTC ATTAACCGTA
GACCCGGAAC ATGATTCTTC TGAAGTACTT CAGCGCTATG CAAAACAGTA TAATGCTATT
CCCGGCAAAT GGTATTTCCT GACCGGAGAA AAGGATACGA TCTATACCTT GGGGCAGAGA
CAGTTCTTTT TGACTGCAAA GCAAAACGAA GAAGATCTGA CAGACTTTCT GCATAGCGAA
CGTATTGTAT TGGTAGATAA AAACGGATGG ATCAGAGGCT ACTATACAGG CACCAATGAG
AAAGATGTAG ACAGACTGAT TACAGAACTT AAAGTATTAC AAAAAATAGA GCGTGATGCA
AAACGAAAAT AA
 
Protein sequence
MNTTKKTVYL CLALLVPVFL IFLFTFFART QHTLPVYFAY DSTETERGYI ITDAHRIPAY 
TLTDQNGDAF KSTAYDSSFK VYDFVFTRCG SICPEMTTQM IRVQEAFKHD KDVVLISLTV
DPEHDSSEVL QRYAKQYNAI PGKWYFLTGE KDTIYTLGQR QFFLTAKQNE EDLTDFLHSE
RIVLVDKNGW IRGYYTGTNE KDVDRLITEL KVLQKIERDA KRK