| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2162 |
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| Symbol | yjeP |
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| ID | 4184724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2511593 |
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| End bp | 2513977 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638072162 |
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| Product | periplasmic binding protein; mechanosensitive ion channel component |
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| Protein accession | YP_678767 |
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| Protein GI | 110638558 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.387859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGTA CGTTGCACCA TGCCGCCTTG CTTTTTCTTT TAATTACTGT ATGCTTATTT
AAAAGTTGTT ATACTGCTTA CGCGCAGGAT TCCGTTTCTA AAGGAAAGGA TTTTAAACGT
GAACGGAACC GTTCATTTGC GCTTTTCAGT GATTCTGCCA GTGCTACACA AGCAGAGTAT
ATGCTGCATC TTGAAACGGT TTTTCAAAAA ATGGATTCCA TTCAGAACGA AAGTATTTTA
AGTCCGGAGA TACTGTTATA CGGGCAACAA CTGAATGAAA GTGATTCCAT TATACAGTTT
GTAAACCAAA GTCTCCTGAA ATACAATCAA ACACTGAACA TACGTAACAT CGAAATGTTA
AAGATTCTGC TGGAAGATGT ACAGACAGAT CTTCAGAAAT TCAATAAAAG TTTTAAAACA
ACATACAATA CTTTATCGGC ACTTAAAAAT GAAATCCGGG ATATGAGACA GGATACACTT
CTGCGTCAGA TGTTCCGGGA CAGTACAACA CGTAAAAAAT TCCTGCCGCA GCTTCAGGAC
CTGCGAACAA GCAGAAGATA CACCGATAGT ATGCTTACTG CCAGACTTTC TATTATTAAC
GGATTTAAAA GCAGAACATC AGCAGCATCT ATTTTAAGTT CGAAACTTAT TAATAAACTA
AACAAACAAT TAAGTTCTGC CAGTCAAAAA GTTTTTGCAC AGGAATTACA TTACCTGTGG
GAAAAACCTG AACGCGGCGA AGAAAAAGAA GAAAGCGTAT CATCGGTATT TACTGAAGAA
CAGAAAGCCT TGAATTTTTA TTACAGCAAT TCAACAGAAA ACCGGTTTAT AAACTGGACC
ATCGGATTAT TATTTCTGTT CTGGATTATC CGGAATGTAC GTATACTCAA ACGTCTCAAC
AAACTTGACA CCTTAAACCA GTATAACGTC ACCGACATTA CACGCCAGCC CATTGCTTCC
GCATTCGCTG TTATCTTCAG CATCGCGCCG CTCTTTGACT TGCATGCTCC GGCGGCATAT
GTGCAATTGG TACAGTTCCT GTCTGTTATT GCGTTAACAT TTCTTTACCG CAGACAGTGG
GCCGCTCCTA TTTTTTATTC CTGGTTAGCA ATCATTCTCT TATTCTTTTT ATTTGGGTTC
ACCAGCCATA TTTTAGTACC GGTATTCTGG CAGCGGTGTG TTATGCTGCT GCTGAATCTA
TCTGCTATTG CTGTTGCCTT ATATCTGCGA AAAAAATTAC CCGGATCTAT TCAGCTCCGG
CGCTTTATCC GCGCTGTACT GATCATAGAA ATCTGCCTGC ATGTGCTTGC GATCTTATGT
AACATTACCG GACGTATTAG TCTGTCGCAA TTATTAGGTT CTACAGGAAT TCTGGCTGTC
ATGCAGGTGC TTTCGTTATC CATGTTAGTC AAAATTTTAC TGGAAGCAGT TGTAATGCAA
ATTCATACCA GCCGGATTCG TCAGGGAATC GAACATCCGT TTCAGGCAGA CCGGGTAGTT
ACATCGTTAC GAAAACCACT TTTATGGCTC GTTGTAATGA TCTGGTTTAT TGTGTTTACA
ACAAACCTCA ATATTTATGA TTCAATCTTT AATGGCACAG CTGATTTTTT AAGCGCACCA
AGAAGTCTGG GCAGTATCTC CTTTACGTTC GGTAATATTA CACTGTTCTT TTTTATTATC
TGGCTGGCAC ATTTTTTACA ACGGTATATC AGCTATTTAC TGGGAGATAC CGGCGACGAT
GAAGGCGAGG AAGGACTGGC ACAACGTTCC AAACTTGTCA TGACACGGTT AATTTTACTT
GCACTGGGTT ATTTAATTGC CATAGCTGCA TCCGGAATAC CTGTCGATAA GATTACCATT
GTTTTAGGCG CCCTGGGTGT TGGTATTGGA TTAGGCTTGC AGAACATCGT GAATAATTTT
GTATCGGGTG TTATACTTAT TTTTGACCGT CCGCTTAAAG TTGGCGACAG CGTTGAAATC
GGAGACCATA GCGGCAGGGT AAAAGAAATT GGTTTACGGT CAAGCACCTT AATTACTTCT
GATGGTGCAG ATGTGATCAT TCCCAACGGC GACATGCTGT CGCAGCACAT CACCAACTGG
ACGCACAGCA ATTCATATAA ACGGATCGAA TTGAAACTGG ATATTGAAAC AATGGAACCC
AAGGATAAAA TTACTTCCAT ACTTAAAGAG GTAATTAAAT CTGCAGATCA TGTATTGAAA
AAAAGAGAAC CGGTAGTATT ACTTGAGAAT ACAAAAGAAA ACGCATACAG CATGGACGTT
TATTTCTGGT GTGAAGATTA TTACAAAGCA GATCAGACAA AAAGTGAAGT ACGCTATCTG
ATCTATCAGG AATTAAAACT AAACGGGATT CGTGTAAACG GATAA
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| Protein sequence | MIRTLHHAAL LFLLITVCLF KSCYTAYAQD SVSKGKDFKR ERNRSFALFS DSASATQAEY
MLHLETVFQK MDSIQNESIL SPEILLYGQQ LNESDSIIQF VNQSLLKYNQ TLNIRNIEML
KILLEDVQTD LQKFNKSFKT TYNTLSALKN EIRDMRQDTL LRQMFRDSTT RKKFLPQLQD
LRTSRRYTDS MLTARLSIIN GFKSRTSAAS ILSSKLINKL NKQLSSASQK VFAQELHYLW
EKPERGEEKE ESVSSVFTEE QKALNFYYSN STENRFINWT IGLLFLFWII RNVRILKRLN
KLDTLNQYNV TDITRQPIAS AFAVIFSIAP LFDLHAPAAY VQLVQFLSVI ALTFLYRRQW
AAPIFYSWLA IILLFFLFGF TSHILVPVFW QRCVMLLLNL SAIAVALYLR KKLPGSIQLR
RFIRAVLIIE ICLHVLAILC NITGRISLSQ LLGSTGILAV MQVLSLSMLV KILLEAVVMQ
IHTSRIRQGI EHPFQADRVV TSLRKPLLWL VVMIWFIVFT TNLNIYDSIF NGTADFLSAP
RSLGSISFTF GNITLFFFII WLAHFLQRYI SYLLGDTGDD EGEEGLAQRS KLVMTRLILL
ALGYLIAIAA SGIPVDKITI VLGALGVGIG LGLQNIVNNF VSGVILIFDR PLKVGDSVEI
GDHSGRVKEI GLRSSTLITS DGADVIIPNG DMLSQHITNW THSNSYKRIE LKLDIETMEP
KDKITSILKE VIKSADHVLK KREPVVLLEN TKENAYSMDV YFWCEDYYKA DQTKSEVRYL
IYQELKLNGI RVNG
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