Gene CHU_2029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2029 
Symbol 
ID4184554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2362629 
End bp2363165 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content39% 
IMG OID638072032 
Producthypothetical protein 
Protein accessionYP_678637 
Protein GI110638428 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1331] Highly conserved protein containing a thioredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.213181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAA AAATCAGCGT ATTCGCTGCA CTGTTCCTAT GTGTGATATG TGCAGGTTTT 
ATCTTTCTTC CAAAAGAAAA TGAAACAGCC TCAACAACGG TAGAAGAAGT TAAATGGTTA
ACGTATGACC AGGCAGTTGC ATTGAGTAAA AAAAATCCGA AACCTATTTT CATCGATGTG
TATACAGATT GGTGCGGCTG GTGCAAAACA ATGGATAAAA ACACATTCAG CAATCACAAA
GTCGCAGCTT ATCTGAACAA ACGTTTTTAT TCCGTAAAAT TAAATCCAGA GAAAAAAGAT
ACGGTGCATT ACAAAGGTGT TGCCATGACA AACGGCGCAC TGGCAGGTAA AATATTTCAC
GCAACTTCCT ACCCTACTAC CGTGTACCTG GAAGGCGACG AAACATTATT GCAGCCGATA
CCGGGCTATC AGGCACCAAA TGATTTATAC CGCATCATTC ATTATATTGG CGAAAACCAT
TATAAAACCA CAACGTGGGA TGATTTTTCT AAAAGTTTTA ACGAATCAGC TGAATAA
 
Protein sequence
MKSKISVFAA LFLCVICAGF IFLPKENETA STTVEEVKWL TYDQAVALSK KNPKPIFIDV 
YTDWCGWCKT MDKNTFSNHK VAAYLNKRFY SVKLNPEKKD TVHYKGVAMT NGALAGKIFH
ATSYPTTVYL EGDETLLQPI PGYQAPNDLY RIIHYIGENH YKTTTWDDFS KSFNESAE