Gene CHU_1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1978 
Symbolflu 
ID4186069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2306765 
End bp2309158 
Gene Length2394 bp 
Protein Length797 aa 
Translation table11 
GC content43% 
IMG OID638071981 
ProductN-acetylglucosamine-1-phosphate uridyltransferase 
Protein accessionYP_678586 
Protein GI110638377 
COG category 
COG ID 
TIGRFAM ID[TIGR02543] Listeria/Bacterioides repeat 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.752482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TTTTACCTGG AATTCTTTGG ATGAGTATTT TTTTTAATCT CGCTGCGCAG 
AAAACCGTTT TCAGGCCAGC AGAATTTGAT AATCCAGCCA GTGAATATTA CAACAATGTA
TCTGAAACAC GCAAATACGA ATCTGCAAAT TTTGTTTTGT ATTGGGGAGA TAAAGTAGGA
ACAAACCCTG CCGTATATGC AGATGCTGAT TTGCGTTTCA ATCCGCAGGC GGTGGCAGAT
ACACTCGAAT ATATTTTCAA ACGCTACATC ACCGATCTGC ATTTTATTAA TAATGGCTCT
TCCACAAATT TCGGTAAGTA TAAGATTATG ATTATGATGA TGAATACCTG GTCATCTACC
GATGCCCGTT TAACAGGCTT TGCGGCTGCC AGTTCATTCA GTAATACTAT CGGCGCCATG
TTTGTACATC CGCAGGCAAC AAAAGATGGA GGGGCGCTTA GTCACGAGTT TGCACACACC
TTGCAGATGA TGATGCGTAT TCAGGAAAAT CCGGGCAACG GAAATGCCTT TGCAGGATAT
GACTGGGCCG GTCCGTTTTT TGAAGGGCAT GCTAATTACA TGCGTGCGAT GGCATATCCA
AAGTGGGCAG ACACCGACGG TACACTTACA CGATGGCTGC AGACAAGGCA CTTTATGTGG
TCTTCTAACC GCCATCATTA TACCAATTAC CATTTACTGT TTTATGTGCA GGAAAAAGAA
GGCTTTGATT TTACCAGAAG AATGTGGGCT GAATCAAAGA ATCAGGAACA TCCGCTGGAA
ACCATTAAAC GGTTAAAAGG TTTTACACAG GAAGAGTTAA ACAATTATCT ATGGGGATAT
GCCCAGCGCC AGCCAGCCTT TGATTACCCG ATCCAATGGA ACGATCAGAT CAATACTGCC
AATAATTTTG GAAAAACAAT CCGCAGCGTA TATCAATCCA TAAAGAATAA TATGCCGCGT
TATGTAAGCA GACAGTTTAC CTTACTTACA AAAGTAGCAG GTACTACGGA TCAATACTAT
ACCAACGATG ACTGGGCCCC TCAGGATTAC GGCATGAACA TTATCCCGTT GTATCCGACG
TGTGCGGAAA CACAAAAGAA AGTAACCATT AAGTTTAAAG GACATACAGA AGTAAACACC
ATACAGGCCG GCTGGCGGTA CGGTTTTGTA ACTACAAAGG CAGATGGTAC CGTTTCGCGT
TACAGCACTA TGTACAGTAC AGATGGCGAA GCTTCGTTTA CACTGGATGC AGCAACGGAA
TCAAACATCT ATCTGGTCGT TTATTCGGCA CCTAAGGTGC ATGTGAATTA TAACATGGAT
GTAGGGTATC CCAAACAACG CAGGTATCCC TATGAATTAA AAATTGCTAA TGCCGTACCC
GAAGGATACC AGGCGGCGGC TGATTTTAGA AAGTTTTTGA AAACAAACGG TAAGATTCAT
TCCAACGGGG GCGGCTGGAT CTCCAATAAT GCCAGTGTTG CATCAACCGT ATATGTTGGG
CCATATGCCA TTGTTAAAGG CGGTACACTT ACAGGCAGCG TTCGTATAGA AGATTATGCA
ACAGTTGAAG GTGGTAATAT CAGTGGCAGT GCCCTTATAA AAGGAAATGC CTATGTGTAT
AATGCAACCA TATCCGGAAA TGCACTGATA GAAGGTAATG CCTGGATGGA AGGCGGTTCA
GTAACCAACA CGGCAAATCT AAAAGGCAAT GCCATGTGCT GGGCTGCAAA TTATTCCGGA
AACGTAATTG TGGGCGGAGA TGCAGAAGTA GGCAGTTGTG CATCGGGTGT TTACATGCAG
GCTCCATATT GGAGAAATGG CAGAAGCGAT TGCGATGGGA AAGGAGCAAC CGATGTTTCG
AATGTTGATA GTAACGCTCC GTTTACCAAT TTTACTGCCG TACAGATGGC ATTCAATACA
ACACCTTCGT GTACAGATGC CGTAACCACT TATACGTTGG CTACAACCGT TGCTGGTTCC
GGTACGGTGA GTCCGGCTTC CGGTACATTC AATGCCGGTA CAACACAAAC GCTTACTGCA
ACAGCTGCTG CAGGGTATGT GTTCAGCCGC TGGAGCGGCG ATGCATCCGG TACTGCAAAT
CCCTTAAGCA TTACCATGAA TGCGAATAAG AATATTACAG CAACGTTTAG TTCTATTACA
ACGGATGTAC ATGCAGCTGC TGATATAGCT CAAACCCGCA TCTATCCGAA TCCAAGTACG
AATACATTTA CGCTTGAAAC CGGTATGGCG ATCAATGTAG ATGTTTATAC CATGACCGGA
AAACTTGTAG CATCATACAA AAATGTTGAA TCTGTTTCAT TTGGCGAAGA GCTGAATGCT
GGTATATATA TGCTTAAGGC CGGAAATGAA TTTTATAAAA TCATTAAAGA ATAA
 
Protein sequence
MKKLLPGILW MSIFFNLAAQ KTVFRPAEFD NPASEYYNNV SETRKYESAN FVLYWGDKVG 
TNPAVYADAD LRFNPQAVAD TLEYIFKRYI TDLHFINNGS STNFGKYKIM IMMMNTWSST
DARLTGFAAA SSFSNTIGAM FVHPQATKDG GALSHEFAHT LQMMMRIQEN PGNGNAFAGY
DWAGPFFEGH ANYMRAMAYP KWADTDGTLT RWLQTRHFMW SSNRHHYTNY HLLFYVQEKE
GFDFTRRMWA ESKNQEHPLE TIKRLKGFTQ EELNNYLWGY AQRQPAFDYP IQWNDQINTA
NNFGKTIRSV YQSIKNNMPR YVSRQFTLLT KVAGTTDQYY TNDDWAPQDY GMNIIPLYPT
CAETQKKVTI KFKGHTEVNT IQAGWRYGFV TTKADGTVSR YSTMYSTDGE ASFTLDAATE
SNIYLVVYSA PKVHVNYNMD VGYPKQRRYP YELKIANAVP EGYQAAADFR KFLKTNGKIH
SNGGGWISNN ASVASTVYVG PYAIVKGGTL TGSVRIEDYA TVEGGNISGS ALIKGNAYVY
NATISGNALI EGNAWMEGGS VTNTANLKGN AMCWAANYSG NVIVGGDAEV GSCASGVYMQ
APYWRNGRSD CDGKGATDVS NVDSNAPFTN FTAVQMAFNT TPSCTDAVTT YTLATTVAGS
GTVSPASGTF NAGTTQTLTA TAAAGYVFSR WSGDASGTAN PLSITMNANK NITATFSSIT
TDVHAAADIA QTRIYPNPST NTFTLETGMA INVDVYTMTG KLVASYKNVE SVSFGEELNA
GIYMLKAGNE FYKIIKE