Gene CHU_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1930 
Symbol 
ID4184279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand+ 
Start bp2260329 
End bp2260937 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content37% 
IMG OID638071932 
Producthypothetical protein 
Protein accessionYP_678538 
Protein GI110638329 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.822803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.390341 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA AATTACTTCT TTCTGGCGCA GTATTAGCTG CAATTATGTT CTCTTGTAAC 
TCTGAAAAAC CTGCTGAAAC AGCAACTGCT GTTGATTCAT TAGGTACTGA AGCTACTTAT 
GCTGTTGATT CAGCTGCATC TAACATCTTC TGGGAAGGTC AAATGTTGAA AATGCACAAA 
CACTTTGGTG ATTTAACAAT CTCTGAAGGT TCTTTCACTG TTAAAGGTTT ACAGGTAACT 
GGCGGTACAT TTACTGCAGA TATGAAATCA ATCGTTCCTA CAGACAGCAA CTACAGCAAA 
GAACATCCAA AAGGTTACTT AGTAGGTCAC TTGAGCAATG CAGATTTCTT TGCCGTTGAT 
TCATTCCCTA CAGCTTCTTT CGTTATCAAA TCTGTTTCTG GAAACACTGC TACAGGTGAT 
TTAACATTAC GTGGCAAAAC AAATTCTGAA ACAGTTACAG ATATCGTTGT TGATACAGTT 
GGTGGTGTTA AAGCTACTGG TAAATTAGTG TTCAACCGTC AGAAATATGG CGCAGCTTAC 
AAAGCAGCTA ACGACATGGT TCTTTCTGAT GACATCAAAT TAGATATCAC ATTAGTTGGT 
AAAAAATAA
 
Protein sequence
MKIKLLLSGA VLAAIMFSCN SEKPAETATA VDSLGTEATY AVDSAASNIF WEGQMLKMHK 
HFGDLTISEG SFTVKGLQVT GGTFTADMKS IVPTDSNYSK EHPKGYLVGH LSNADFFAVD 
SFPTASFVIK SVSGNTATGD LTLRGKTNSE TVTDIVVDTV GGVKATGKLV FNRQKYGAAY 
KAANDMVLSD DIKLDITLVG KK