Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1771 |
Symbol | yiiP |
ID | 4186843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2078145 |
End bp | 2079083 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638071770 |
Product | cation transporter, permease component |
Protein accession | YP_678380 |
Protein GI | 110638171 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.52517 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0251557 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAGG GAGAATCGAA TATTGCGATT GTTGGGGCGT TTACAGCCAA TTTATTAATT GCAGTCATAA AGTTTATTGC AGCAGCTATT ACCGGAAGTT CAGCTATGTT ATCGGAAGGC ATACACTCCC TGGTTGATAC AGGTAATACA GGTTTGCTTT TATTTGGCGA TTATCGCAGT AAAAAGAAAC CTACACCAAG CCATCCTTTT GGTTATGGCC GTGAGCTTTA TTTCTGGAGT CTTGTTGTTG CGATCTCGCT TTTTGCCATA GGTGGCGGTA TGTCTATCTA TGAAGGGATC CTACACATTC AGCACCCGGA AAAAATGGAA GATCCGTTCT GGAATTATAT TGTGATCGCT GTAGCCTTTG TATTAAGCGG CGGTTCATTA TATGTAGCGG TAAAAAAGTT TCTGGAAGAC AATCCGGATA AATCATTCTG GAGAGCCATT AAAGAAAGTA AAGATCCGGG AACGTTCAGT ATTCTGTTTG AAGATACAGC AGACATTTTA GGTCTGATCG TCGCTTTTTT AGGTGTTTAC CTGGGGCATA CCTTAAACAA TCCATACATT GATGGCGCTG CCTCTATTGT GATCGGTTTG ATCTTATCCA GCCTGTCTTT AATGCTTGCG TATGAAACAA AAAGTTTGCT GATCGGCGAG AGTGCCGACG AAACACTGAT CAACGAAATT GTGCTGCTTG TAAAAGAAAA CCCTGCGGTT GTAAACGTAA GAAGTCCGTT AACACTGCAC TTCGGACCAA AAGATATTTT ACTTGCGTTA GATATTCAGT TTGACGAAAA ATTAATGATG AATGAAGTTG CTACCTATAT TGATGAAATC GAACACAATG TCCGCGCTAA ATTTCCGGAG ATTAAGCGCA TCTACATTGA GATCAAATCG ATCACTTATT TTTCAACTTC GACTCATAAG CCCGTTTAA
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Protein sequence | MSKGESNIAI VGAFTANLLI AVIKFIAAAI TGSSAMLSEG IHSLVDTGNT GLLLFGDYRS KKKPTPSHPF GYGRELYFWS LVVAISLFAI GGGMSIYEGI LHIQHPEKME DPFWNYIVIA VAFVLSGGSL YVAVKKFLED NPDKSFWRAI KESKDPGTFS ILFEDTADIL GLIVAFLGVY LGHTLNNPYI DGAASIVIGL ILSSLSLMLA YETKSLLIGE SADETLINEI VLLVKENPAV VNVRSPLTLH FGPKDILLAL DIQFDEKLMM NEVATYIDEI EHNVRAKFPE IKRIYIEIKS ITYFSTSTHK PV
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