| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1700 |
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| Symbol | ybgR |
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| ID | 4184925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2000156 |
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| End bp | 2001067 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638071698 |
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| Product | cation efflux system protein |
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| Protein accession | YP_678309 |
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| Protein GI | 110638100 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1230] Co/Zn/Cd efflux system component |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGAACACA ATCACACACA TCACCACGAT CATTCCATAA TTCTGACACA CGTCAATACA
GCTTTTATCG TTGGTATTAT ACTCAACTTG TTATTTGTTG TCATTGAAGC CATTGTTGGG
CTTTCAGTGC ATTCCTTATC ACTGCTTTCA GATGCAGGGC ACAACCTGGC AGATGTGGCC
TCCTTAGCAC TATCACTGCT GGCCTTTCGT CTGCTGAAAA TAAAATCAAA TGAAAGCTAC
ACCTACGGAT ATCGTAAAAC ATCCATCCTT GTTGCCTTGT TTAATTCCAT GATATTAATC
GCCTCCATCG GAGCCATCTT TTATGAAGCA GCACATCGCT TCTTCAATCC CGAACCCCTG
CCAGGCCAGA CCATCGCTGT AGTGGCAGGT ATCGGTATTT TGATCAATGC CGCTACGGCA
CTCATGTTTT TGCGCCATAA AGAAAAAGAC CTGAATGTGA AAAGCGCATA CCTGCATTTA
ATGAGTGATG CACTTGTTTC CCTTGGTCTG GTTATTGGCG GTATAATCAT GTTCTATACG
CAATGGTTCT GGATCGATAG CGTATTAAGT ATGATTGTTG CAATCATTAT TCTGTTCAGT
ACCTGGAAGC TCTTAAAAGA CAGTTTACGT TTGTCACTGG ACGGCGTACC GGAATATATT
CATATACATG AGATCAAAGA AACCGCGCTG AAGATAGCAG GAGTAAAGGA CCTGCATCAT
ATCCATGCAT GGGCGATAAG TACAACTGAA AATGCATTGA CGGCACATCT TGTATTAGAT
AAAAACACTA CAATCGCAGA TGAAAATATA ATCAAGCGGG AATTGAAACA CGAACTGGAA
CATAAAAATA TTCATCATGT TACGCTGGAG ACAGAACGTG AAAATGATCC CTGTGGAGCA
GAAGTTTGTT AA
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| Protein sequence | MEHNHTHHHD HSIILTHVNT AFIVGIILNL LFVVIEAIVG LSVHSLSLLS DAGHNLADVA
SLALSLLAFR LLKIKSNESY TYGYRKTSIL VALFNSMILI ASIGAIFYEA AHRFFNPEPL
PGQTIAVVAG IGILINAATA LMFLRHKEKD LNVKSAYLHL MSDALVSLGL VIGGIIMFYT
QWFWIDSVLS MIVAIIILFS TWKLLKDSLR LSLDGVPEYI HIHEIKETAL KIAGVKDLHH
IHAWAISTTE NALTAHLVLD KNTTIADENI IKRELKHELE HKNIHHVTLE TERENDPCGA
EVC
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