| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1266 |
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| Symbol | yfiK |
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| ID | 4186958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1477908 |
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| End bp | 1478591 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638071260 |
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| Product | two-component response regulator |
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| Protein accession | YP_677878 |
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| Protein GI | 110637671 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.847879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.913346 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGACTA AAAAGATTAA AGTTTTTATT GCTGATGATC ATGAAATATT CAGAGATGGT
GTACGGCAGC TGATCTCAAA TGAATCGGAC ATGGAAGTTG TAGGTACCGC TTCTTCAGGT
GAAGAGGCGT TGGAACTGCT TAAGGATAAC CACGCCGATG TTGTTATCAT GGATATCCGC
ATGTCAGGTA TGAATGGTTT GGAAACAAGC CGTGCTATTC TTAAGAACGA CAGCAATACG
CATATTCTCT TCTTCAGCTT ATATGATCGG GATGATTATG TTGTGACCGC ACTGGAAATG
GGTGCAAGCG GCTACATACT AAAAGATACC AGTAATAAAA TATTTCTGAA AGGCATTCGC
GCCGTTTCAA ACGGACAGTT TTATTTTACA GGTGATGTTA CGGATGTATT GATAAAAAAA
TACAAGGAAT TAAAAGACGT GAAGAATACG CCTGAAATAT CATCAAGCTC TATTCAGTCT
TCGTTATCTA AAAGAGAATA TCAGATTTTA AATAGGATCC GCGAAGGGAA AACGAATAAA
GAAATTGCGG AAGAATATAA TTTAAGTGTG CGTACGGTTG AAACACACCG AATGAATATT
CTCCGGAAAT TTAATGTCAG CAATTTTGAT GAATTGATAA AAAATACCGA TGAGGTATTG
GGGACAGAAG GGAATGAAGA ATAA
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| Protein sequence | MLTKKIKVFI ADDHEIFRDG VRQLISNESD MEVVGTASSG EEALELLKDN HADVVIMDIR
MSGMNGLETS RAILKNDSNT HILFFSLYDR DDYVVTALEM GASGYILKDT SNKIFLKGIR
AVSNGQFYFT GDVTDVLIKK YKELKDVKNT PEISSSSIQS SLSKREYQIL NRIREGKTNK
EIAEEYNLSV RTVETHRMNI LRKFNVSNFD ELIKNTDEVL GTEGNEE
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