Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1262 |
Symbol | ureF |
ID | 4186954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1473402 |
End bp | 1474103 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638071256 |
Product | urease accessory protein |
Protein accession | YP_677874 |
Protein GI | 110637667 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0830] Urease accessory protein UreF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.614669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTCAT CCAAAGACAA TACACATTTA TTCCTGCTCC TTCAGATGGC GGACTCTGCG TTCCCTGTAG GAGGTTTTGC GTATTCATAT GGATTGGAAT CGGCTGTGAA ACATAATTTA ATATCAGACG GAAAAGGTTT GCGCGAATAT CTGTTGACGT TCTCTGAACA ATTGATCGCA TTTGACTTTC CGTTTATTGC TGCGGCACAT CAGCAATCAA TTACTTCTAT AAATATAGCA GATTTGAAAT CTTTGCTGCA GGTCTACAAA TCGATGTTGC TGAACCCACC TTTGTCGAAG GCAGGATGCG TCATGGGCAG GAACTGGCTG AAGATCTGTA AACAGATTAC AAACAGTTAC CTGATGGATG AAACGGAAGA AGTATTTCGC AAAGAAAATT TAACATTTGA ATTTCCGATC GTTTTCGGAT TAAGCATGCA GGCGTCAAAT TTTACATTGT CACAAACCTT GTTCCTGTAT TTCTACATGT CGATCCGCGA TCAGATCAGC GCGCTGATCC GTTTGGGATC TGCCGGCCCT TCTATGGCGC ACACGGAACT GCAACAGGTT TTACATCTTT TCACCATTCG TATTGAATCT TATATTCCAG TACATTACTC CACTGCTTAT AAATCAGCCT ATCTGCTGGA GCTTGCACAA CTCTCGCACG ATCGGGTTTA CTCTAAATTA TTTCAAAACT AA
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Protein sequence | MISSKDNTHL FLLLQMADSA FPVGGFAYSY GLESAVKHNL ISDGKGLREY LLTFSEQLIA FDFPFIAAAH QQSITSINIA DLKSLLQVYK SMLLNPPLSK AGCVMGRNWL KICKQITNSY LMDETEEVFR KENLTFEFPI VFGLSMQASN FTLSQTLFLY FYMSIRDQIS ALIRLGSAGP SMAHTELQQV LHLFTIRIES YIPVHYSTAY KSAYLLELAQ LSHDRVYSKL FQN
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