Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1153 |
Symbol | |
ID | 4184525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1326433 |
End bp | 1327134 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638071150 |
Product | DNA repair protein |
Protein accession | YP_677768 |
Protein GI | 110637561 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAATT ATATACTACC CGCGTCCAAG ATTTTATCCT GGGCAGAAGA AGACCGTCCA CGTGAAAAAC TTTTATTAAA AGGCATTTCT GCCTTGAGTG ATGCAGAACT CATTGCTATT TTACTTGGCT CAGGCACAAC AAATGTAAGT GCTGTAGAAC TTGCCAAACA GATTATGCAG GACAATAATC AAAGCCTGAA TAACCTTGCC CGGCAGAATG TAAAAGCCTT ACAAAAATTC AAGGGAATTG GCGAAGCTAA GGCAATTACC TTAGTAAGCG CATTGGAATT AGGCAGGCGC CGGAAAGTTG CAGATGTTGA AATCAGGCCA CAGGTAAAAT CTTCCGAAGA TGTGTACAAC TATATGCAAA GTAATCTGGC TGATCTTCCG TATGAAGAAT TCTGGATTTT ACTATTGAAC CGGGCAAATC GGATTGAAAA GAAAATACGC ATCAGTACCG GCGGCGTTTC AGGTACAGTA GCTGATCCTA AGCTCATTTA CAAATATGCG TTGGAAAATT TAGCTTCATC TATTATCTTA GTACATAACC ACCCCTCCGG AAATACGAAA CCAAGTGAGG CAGATTACAG TTTAACTAAA AAATTGTGTG AGGCAGGAAC GTTTTTAGAA ACACCTGTTT TAGATCATGT GATAATTTGT AATCATACGT GGTATAGTTT TGCAGATGAA GGAAAAATAT AA
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Protein sequence | MENYILPASK ILSWAEEDRP REKLLLKGIS ALSDAELIAI LLGSGTTNVS AVELAKQIMQ DNNQSLNNLA RQNVKALQKF KGIGEAKAIT LVSALELGRR RKVADVEIRP QVKSSEDVYN YMQSNLADLP YEEFWILLLN RANRIEKKIR ISTGGVSGTV ADPKLIYKYA LENLASSIIL VHNHPSGNTK PSEADYSLTK KLCEAGTFLE TPVLDHVIIC NHTWYSFADE GKI
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