| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1060 |
|---|
| Symbol | rmeD |
|---|
| ID | 4185018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 1224679 |
|---|
| End bp | 1225581 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638071059 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_677677 |
|---|
| Protein GI | 110637470 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.497246 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCAG CTGCGCATTA TGATATAGCC CAATTGGAGC GATTGGTAGG AGTGAAGGCT
CATACTCTTA GAAAATGGGA GGAACGGTAT CAGCTGATTT CACCTGAACG CAGTGCCGGT
AATATCCGCT TTTACAATGA TGCACAAGTA ATCCAACTTC TAAATATCAC GCTGTTACTT
TCCGAAGGTT TCAAAATATC GCAGATTGCA GCGATGTCTT CTGCAACTAT CCGGAAACAT
GTACAAAACA TTCAACAACA TTCTCCTGAA AGCAATTCCG GCAAACATAC AGCCAGCCTG
CATCAATTGC TTTCAGCCAC ACTTACATTT GATGAGTTGC TTTTTGAAAA AACGGTTGAC
CTGGCGGTAA AGCAGCTTGG AATGCTCCGG ACTGTGAGGG AACTTTTTTA TCCATTTTTT
TACAAGATCG GATGGATGTG GCTATCCGAC GAGGTAAGTC CGGCACAGGA ACATTTTGCC
AGCAACATCA TTCGTCGGAA GTTGATTGTT GCCAGTGATA CGTTGCCGCG CCCTAAAAAA
AAGAAGACTT TTATATTGTT TTTGCCGCCC GGCGAATGGC ATGAAATCAG TCTGCTGCTG
GCAGACTATC TGGTACGCCT TAAAGGCTTT AAAAGTATTT ATCTTGGGCA GAATGTGCCT
TTGCAAAATA TGACAAAAGT AATAGAGACC ACTTCACCTG ACTTCGTCCT AACACTTTTT
TTATCGCGTC AGAATGAGCA GACAGCTCCA GATGCGATCA GGCATCTGGC GAAGACATAT
AAAAAACCGA AGTTTCTTGT AAGCAGTCCT TATATGACAA AAGACTTAGC CGGAGAACCT
AAAAACATTA AAATTCTACA TTCTTCTGAA GACTTCGAGA AGTTATTGGA AAAGCTTACA
TAG
|
|---|
| Protein sequence | MKPAAHYDIA QLERLVGVKA HTLRKWEERY QLISPERSAG NIRFYNDAQV IQLLNITLLL
SEGFKISQIA AMSSATIRKH VQNIQQHSPE SNSGKHTASL HQLLSATLTF DELLFEKTVD
LAVKQLGMLR TVRELFYPFF YKIGWMWLSD EVSPAQEHFA SNIIRRKLIV ASDTLPRPKK
KKTFILFLPP GEWHEISLLL ADYLVRLKGF KSIYLGQNVP LQNMTKVIET TSPDFVLTLF
LSRQNEQTAP DAIRHLAKTY KKPKFLVSSP YMTKDLAGEP KNIKILHSSE DFEKLLEKLT
|
|---|
| |