| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0992 |
|---|
| Symbol | arcB |
|---|
| ID | 4186903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 1137969 |
|---|
| End bp | 1140059 |
|---|
| Gene Length | 2091 bp |
|---|
| Protein Length | 696 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638070989 |
|---|
| Product | two-component sensor histidine kinase |
|---|
| Protein accession | YP_677609 |
|---|
| Protein GI | 110637402 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0439814 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.153335 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAC CCGCTTCATA TAGAGCTGCA TTTTTTAAGT CAACATTCGT TCTCTTTTCT
GTTTTTTTTA TTTACCTGTC TACAATCTGC AGCTTCGCTG ATACAACCTC TGCATGGGAG
TTTGCAATAA CTCCCATGCC CATAAACAAT AAACAATCGG GCGGTAAATT TACCTATATC
TATACAGCCT CTGCTGCAAT AACGCCCGAT AGCGCCTTAA AACTGGCCAA GCAGGCTTTT
TTCAAAAAAA ACCACACCCT AATATATTCC AGTGTCAGTA CAGTTGAAAA GCCTGTATGG
GTATATTTTA AAACCGACAC CTTTCTATCT TCTGAAACAC ATTTACTGAT TCTTGAAAAC
TGTAACTTCC ATTCCATTAC ACTCTATAAA TATGCGCATG ACTCATTAAA ACGTATTGCG
CAAAAAGGTA TGAGTGTACC TTACCCATCC GATAATTTAT TTCCGGAACA AACATCTTTC
GTTGTTGAAC CTAACACGAT TTATTTCCTT GAATCCATTG ATATATATAA CACGGTACTT
CCTGTTTATA TCCGGACAAA TACGATAAAC ATCCACACTT CTGTTTTTAA AAATTATTTC
AATGGTTTCT ATTGGGGTGT TATTGCTGTA ATGGGCATGG TAGCCTTATT TTTCTTCATC
CGGTCTAAAG AAAGAGCGTT CATTTATTAC TCCCTTTTTT TATTCGGAAC TATTGCCTTG
AACCTGTGTC TGGAGGGATA CTTCTTTGCG TATTTCTGGC CCGGGCATCC TCAGATAAAC
ATGTATAAAA TTGCTATCTA TGCCTTAAGT GCGGTAACAA CACCATTATT TGTCTACCAT
TTTTTAGACA TCAAATCGTA TTACCCCGGC ATTAAATTTG TCTTTCTGAT ACTTACCTCC
ATATTCATAT TGATCGCCGT GATGAGTTTT GCCGGCTGGC ATGCACAGGC TTTATATACA
TTACAAATGA CTGCTTTTTT ACAGATCATC ATTTATATTT TATATGGTCT TGGTATCCGG
CGAAAAGGTA ATGCAAATGC GTCATACTTC ATATGGGCGT GGTCACTGTA TCTATGTTCC
ATTATGTTTG CTGTCCTGTC ATCTTTAAAC ATTATTCCGA GCACTGCTTT TGTGAATAAT
TATGTACAGG TCGGTACGCT GATTCAGGGT GGAATCTTTT CACTGATCAT GGCCGGTAAA
TACCAGCAGT ATAAACTGAA ACATATTCAA TCGCAGCAAA AAATGATTGA AGTATTAAAA
GAACGTGAGC TCCTGTTAAC GAATCAGAAT GACACCCTTG AAACTACTGT ATATAACCGT
ACGGAGGAGT TAAAGCGATC AAATAGTGAA CTTAATAATC TGAATGAAAA GCTGAATGAA
CTGGTTTCTC AAAAAACGTG GGAGCTGCAA AAATCAATCG AAGAGATAAA CAATACCAAC
AATCAGCTGC AGCAGTTCAA TTATATTACT TCCCATAATT TACGCGGGCC AATCTCAACA
CTAAAAGGAT TATTTGAATT ATATAATCAG GAAACGAACC TTTCAGACAA GCATATCTAT
GTTGACAAAA GCCTTATTGT TATCAATAGA ATGGATGAAA TTTTACGGGA TTTAAATAAA
ATTCTATCAA ATAAAAACAC GGAAAAAATA AAAGAGCTGA TTGACTTTGA TACGATTATT
GCAAACAATT TAAAGCAGCT TGATATTAAG AGAAAGAGTG TAAATATTTA TATTAATCCC
GCCCTTGAAA TAACAGGTAT TAAGTCTTTT TATGAAAGTA TTTTTTACAA TCTGTTTTCC
AATGCACAAA AATACAAGCA CCCGGAAAGA TTGTTGCGAA TAGACATTCA AATAACGTCG
GCAGCTGCAA ACTCTTTTAC CATCCATATC TCCGACAACG GAATCGGAAT GGATGTATCA
AAAGTGGGTG ATAAATTATT CGGTTTTTAT AAACGCTTCC ATGTACATGT GGAAGGAAAA
GGTTTAGGCC TGTATATTAC AAAAAGTCAG GTGGAAATGC TTGGAGGCAC AATCCGTGCG
GAAAGCGAAC TGCATGTAGG CACAACATTT ATTATTGAAA TACCTTGTTA G
|
|---|
| Protein sequence | MTKPASYRAA FFKSTFVLFS VFFIYLSTIC SFADTTSAWE FAITPMPINN KQSGGKFTYI
YTASAAITPD SALKLAKQAF FKKNHTLIYS SVSTVEKPVW VYFKTDTFLS SETHLLILEN
CNFHSITLYK YAHDSLKRIA QKGMSVPYPS DNLFPEQTSF VVEPNTIYFL ESIDIYNTVL
PVYIRTNTIN IHTSVFKNYF NGFYWGVIAV MGMVALFFFI RSKERAFIYY SLFLFGTIAL
NLCLEGYFFA YFWPGHPQIN MYKIAIYALS AVTTPLFVYH FLDIKSYYPG IKFVFLILTS
IFILIAVMSF AGWHAQALYT LQMTAFLQII IYILYGLGIR RKGNANASYF IWAWSLYLCS
IMFAVLSSLN IIPSTAFVNN YVQVGTLIQG GIFSLIMAGK YQQYKLKHIQ SQQKMIEVLK
ERELLLTNQN DTLETTVYNR TEELKRSNSE LNNLNEKLNE LVSQKTWELQ KSIEEINNTN
NQLQQFNYIT SHNLRGPIST LKGLFELYNQ ETNLSDKHIY VDKSLIVINR MDEILRDLNK
ILSNKNTEKI KELIDFDTII ANNLKQLDIK RKSVNIYINP ALEITGIKSF YESIFYNLFS
NAQKYKHPER LLRIDIQITS AAANSFTIHI SDNGIGMDVS KVGDKLFGFY KRFHVHVEGK
GLGLYITKSQ VEMLGGTIRA ESELHVGTTF IIEIPC
|
|---|
| |