Gene CHU_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0987 
SymbolyigR 
ID4183529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1133142 
End bp1134458 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content40% 
IMG OID638070984 
Productprotein kinase 
Protein accessionYP_677604 
Protein GI110637397 
COG category[R] General function prediction only 
COG ID[COG0661] Predicted unusual protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.290468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0246487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGC AAAATAATAT TCCTACCAGT AAAGTTGAAC GTGCAACCAA ATTTGTACAG 
ACAGGAGCAA AGATAGGAGG GAATTATATC AAGCATTATG CGAAGAAGGC TTTCAATCCG
GAGTTGACAA AGGAACAGCT GCATGAAGAT AATTCGAAAG ATGTATATGA AACGCTTAGT
CAGCTTAAAG GCAGTGCGCT GAAAGTAGCA CAGATGCTGA GTCAGGATAA GAATATGCTT
CCTCAGGCAT ATGTTGATAA ATTCACAATG GCACAGTACA GTGCACCGCC TTTGTCATAT
CCATTAGTAG TTAAAACCTT TCAGAAATAT TTTGGCAAGT CGCCTGAGTC GATGTTTGAT
ACCTTTGAAC GTAATGCTTC TAATGCAGCA TCCATCGGAC AGGTTCATAA AGCAACCAAA
GATGGTAAAG TTTTCGCCGT TAAAATTCAA TATCCCGGTG TAGCCGAAAG CGTTTCATCT
GATCTGAAGT TGGTAAAGCC ATTCGCTCTT CGATTAATGA ACATGAAGGA GAAGGATCTG
GACATGTATA TGGATGAAGT AGAATCTAAA CTGATTGAGG AGACGGATTA CGAACTTGAG
TTGAGACGGT CGAACGAAAT TTCAACGCAA TGCGCACACA TTACAGGTTT AGTCTTTCCT
GCATATTACC CCGAATATTC AAGCAAACGT ATCCTTACTA TGGATTGGCT GGAAGGGTTA
CATATGAAAG AGTTTCTGGC AACAAATCCT TCGCAGGAAA TCCGGAATCA AATAGGGCAG
CTGTTGTGGG ATTTCTATGA TTTCCAAATG CATCAGTTAC GTACGGTACA CGCAGACCCG
CATCCGGGGA ATTTTCTGAT GCGCAGCAAT GGTTCACTTG GCGTTATTGA CTTTGGATGT
GTAAAAGAAA TTCCCGAAGA ATTTTATACC GAATATTTTA AACTGCTGAA TAAAGAAGTA
ATAGAAGATA AAACGGAATT ACTGAAAACC TTTGAACGAT TGAATTTCTT TGATGCGGAA
GATACTGCTT TGCAGCGTGA AATATTTTTT GATTTATTCT GTGAGATGAC GCATTTGCTT
GGCTTGCCGT TCTACAGCGA AACATTCGAC TTCAGTGATG ATTCCTATTT CAAAAGAATT
TATGATTTTG GAGAGCACAT CAGCAACGTA AAAGAAATTA AAGATGCCCG CCAGGCACGT
GGTTCGCGGC ATGGTATTTA TATTAATCGT ACTTATTTCG GTTTGTATAA TTTACTGAAT
CAATTGGGTG CAAATGTGCG TACAAAGTCT TATGGTGAAG TAGCGATAGA GGTATAA
 
Protein sequence
MKEQNNIPTS KVERATKFVQ TGAKIGGNYI KHYAKKAFNP ELTKEQLHED NSKDVYETLS 
QLKGSALKVA QMLSQDKNML PQAYVDKFTM AQYSAPPLSY PLVVKTFQKY FGKSPESMFD
TFERNASNAA SIGQVHKATK DGKVFAVKIQ YPGVAESVSS DLKLVKPFAL RLMNMKEKDL
DMYMDEVESK LIEETDYELE LRRSNEISTQ CAHITGLVFP AYYPEYSSKR ILTMDWLEGL
HMKEFLATNP SQEIRNQIGQ LLWDFYDFQM HQLRTVHADP HPGNFLMRSN GSLGVIDFGC
VKEIPEEFYT EYFKLLNKEV IEDKTELLKT FERLNFFDAE DTALQREIFF DLFCEMTHLL
GLPFYSETFD FSDDSYFKRI YDFGEHISNV KEIKDARQAR GSRHGIYINR TYFGLYNLLN
QLGANVRTKS YGEVAIEV