Gene CHU_0804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0804 
Symbol 
ID4183978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp908881 
End bp911721 
Gene Length2841 bp 
Protein Length946 aa 
Translation table11 
GC content41% 
IMG OID638070810 
Producthypothetical protein 
Protein accessionYP_677431 
Protein GI110637224 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.771937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0719166 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT TTTTACTTTG GATGCTCAGT CTTACTTTAT TTTCATCCTT GCAAACTAAC 
GCCCAATGTA CCATTGATGC TGGAGCGAAT ACTACAGTTT GTGACTCGTG GTCATCATTC
TTAATACAAG GAAATGGAAC AGGGTATGAT ACTTATCAAT GGACAACCAG CGGTACAGGT
ACATTTTCCG ACCTGTCAAA TAATGGCCTT ACGGCCTACT ATATACCTTC TACAGCAGAT
ATTACTGCAG GCTCGGTAGA TTTAAGTGTA ACAGGTACCG GTAATTGCGC TTCTAAAACA
GCTGTTTCGA TTATAACCTT TCACACTGCT CCTCTATTAA ATGTAGATGC AGGAGCAGAC
CAGACAGGCT GCGGCGCGCT TACATTAACT GCTACTGCAA CCAATGCAGA GTCGTTCCAT
TGGGTTGCTC TGGGATCTGG TGCATTAGCT AATGAAAATG ATCTTACGAC TAAATATACT
CCGACTAATG CGGATCAATT AAATGGATCT GTTCGGCTAT GGGCAATAAT ACGTGCAAAT
GATCCTATTT GTGGTTATGC AAGCGACACA GATGAAGTTG TTATAAACTA TATTCCGCCC
AATGAAGTAT ATGGAGGACC TAACTTAGTA TCCTGTCAAA CTGCGTCTGT AAGTATAACC
GGGTCTTCCT TGACAAATGC AACAGGTGTT ATCTGGTCTA CATCCGGAAC AGGTACCTTT
TCAAGCACAA CGGATCTACA TCCGACCTAC CAGCCTTCTA CTGCAGATAT TTTAGCAGGC
AATGTACATT TAATGGTACA AACTACTGGC AATGGTTCAT GTCCCGAAGG AAGAGATACA
TTGCAAGTGG ACATTTTCAG CATCGCTGCA TCTGTGAACG CTGGTGCAGA TCAGACTGTA
TGCAAAGATG TTGTAACCCT TACACCAGCA TACACAGGTA CAAGCGGCGT CACTTGGTCT
ACATCAGGTA CCGGTACATT TAGTGCTCCA TCAACAACAA ACGCAACTTC TGTATATTAC
ACATTATCCA ATGAAGATGT AGCAAATTTT ACAGGTGTGG TAACACTTAC AGCAACTACA
ATCAGTAATG GACTCTGCCC AACTGCGACA GATCATTTAA CAATACGTAC TACCTCAAAC
GCCGGCTTAA ATGTTGGATC CGATACAGTA GTATGTCCTG GCGCGATTAT TTATCCGGTT
GCACATCTTC AGGCAGGTAC GCTAATATGG ACTACTTCAG GTACCGGAAC ATTTTCAGAT
CCTACGTCTC TAACACCTGT TTACACACCA TCAGCGGCAG ATCAATTGCT GGAAGGTTAC
TGGCTAACTG CAACTACACC AAGAACAAAT TGGTGCCTGT CACAATCTGG TACTAAAAGA
GTTTTTCTGA AAGATATTGC AGCAACAGCA AACGCAGGTT CAGATCAAAC AATATGCGGA
AGTATGGCTG CATGCTATGG CACTGTTACA AATGCAACAG GTGGTATCTG GACATCCAGC
GGTACCGGAA CATTTAATCC CGGTTCTAAC TATCTCAGCA CTTCCTATAT ATTCTCTGAT
GCTGATATCG CCAATAGTTT TGTTACACTT ACCCTCACAA CTACCGGAAT GTGCAATGCC
TCAGCCACAG ACGCAATGAC AGTAACAACG CTTGGCGCTT CTGCGCCCGT TTTACATGCC
GGTCCGGATC AGCTTATCAC TGGCACATCT GTTACATTAA ACGGAACAAG TTTTGCAACG
CCTGGCGTGC AATGGTTTTC TTCAGGTACA GGTACATTCA GCAACGCCAA CGCATTATCA
ACAATCTATA CACCATCAAC CCTTGATCTA CAAAACGGAA TTGTATATTT AACGCTTTCC
GGATTAAATA CAATTTGCTA TGTTTCAGAT GTACTATCTG TAAAATTCGG CACAACGTAT
ACACTTACAG GAACAATAAA AGCTGGAGTA AATACACTAG ACAATGGATT GGTTGCCTTA
TACAAAAAAG AAGGCTCAGA ATTATATCTT GCTGAAGCAG ATTCAATCAA ACCTTCAGAT
GCTGGTACAT ATGCATTCGA TAATGTAGTT ACGGGTAAAT ATATCTTACT AGCTACTCCA
ACAGACAACT CAATCTACCA AAGCAATTTC TTACCTACTT ATTTAGGTGA TACTCAAGAT
TGGCAAAATG CACAGGTAAT AACCGTTTCT GATAATAGCT CTTATCCAAT TTCATTAACT
CCTTACGTAA GCACAAATTC ATTCTGGAAT ACAGGGCTGG ATACCATCAC TGGTATTGTC
TATGTAGACC ATACATCACT TGCTGCTGCA CGTATACAAA CTACTTCCGG TACACCGGCG
GTACATGCAA TCGTTTACCT TGCAGATGCA AACGGGAATA AAATTTCATA TACCCAAACA
GATACAAGCG GAAGATACAA ATTTGTAAAT GTCATAGCCG GTGCATATTC AGTTATTCCG
GAGTATGGCG GAACAAGTTT AGCAGGAACA ACAACTTCCA TTCCGGTTAC CATAGATGGA
AACCCTGCAA CGATAGAAGA TGCCTCTGTA ACAGTTCAAA AAATATCAAC CAGTACAGGA
GTGTTTAGTG CAACAAAATC TGCAATACTT CGTGCGTATC CTAACCCAGC AAAAAATATC
GTTAGTGTTG ATCTGGTAAC TTCTGCAGGA ACAGGTCTAG TTAAATTAAC GAATGAAAAT
GGTACTGTGA TGTTTCAGCA AGCAATGAAT CTAAGCGGAT CATCTATTAC ATTGAACATT
GAAGCATTAC CAGCAGGAAT GTACATTCTT CAGCTTATTG CCGAAGACGA AGTATATACT
TCAAAAGTGG TTAAATACTA A
 
Protein sequence
MKKFLLWMLS LTLFSSLQTN AQCTIDAGAN TTVCDSWSSF LIQGNGTGYD TYQWTTSGTG 
TFSDLSNNGL TAYYIPSTAD ITAGSVDLSV TGTGNCASKT AVSIITFHTA PLLNVDAGAD
QTGCGALTLT ATATNAESFH WVALGSGALA NENDLTTKYT PTNADQLNGS VRLWAIIRAN
DPICGYASDT DEVVINYIPP NEVYGGPNLV SCQTASVSIT GSSLTNATGV IWSTSGTGTF
SSTTDLHPTY QPSTADILAG NVHLMVQTTG NGSCPEGRDT LQVDIFSIAA SVNAGADQTV
CKDVVTLTPA YTGTSGVTWS TSGTGTFSAP STTNATSVYY TLSNEDVANF TGVVTLTATT
ISNGLCPTAT DHLTIRTTSN AGLNVGSDTV VCPGAIIYPV AHLQAGTLIW TTSGTGTFSD
PTSLTPVYTP SAADQLLEGY WLTATTPRTN WCLSQSGTKR VFLKDIAATA NAGSDQTICG
SMAACYGTVT NATGGIWTSS GTGTFNPGSN YLSTSYIFSD ADIANSFVTL TLTTTGMCNA
SATDAMTVTT LGASAPVLHA GPDQLITGTS VTLNGTSFAT PGVQWFSSGT GTFSNANALS
TIYTPSTLDL QNGIVYLTLS GLNTICYVSD VLSVKFGTTY TLTGTIKAGV NTLDNGLVAL
YKKEGSELYL AEADSIKPSD AGTYAFDNVV TGKYILLATP TDNSIYQSNF LPTYLGDTQD
WQNAQVITVS DNSSYPISLT PYVSTNSFWN TGLDTITGIV YVDHTSLAAA RIQTTSGTPA
VHAIVYLADA NGNKISYTQT DTSGRYKFVN VIAGAYSVIP EYGGTSLAGT TTSIPVTIDG
NPATIEDASV TVQKISTSTG VFSATKSAIL RAYPNPAKNI VSVDLVTSAG TGLVKLTNEN
GTVMFQQAMN LSGSSITLNI EALPAGMYIL QLIAEDEVYT SKVVKY