Gene CHU_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0547 
Symbol 
ID4186178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp633739 
End bp635079 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content41% 
IMG OID638070552 
Producthypothetical protein 
Protein accessionYP_677174 
Protein GI110636967 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.395816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTATA TATTTAAAAT ATCAGCCTTA TTGCTATTGC TGTCGCTGCT TTCCTGCAAG 
AAATTTCTTG AAGTGGAACC GAAAGATGCG GTATCGGATC AAATAACAAT TGTAGATAAG
CTGTCTGCAG AAACCGCGCT TAACGGTGCA TACAGAGCGC TTGCCAGCGA TGCGTATTAC
GGACAGAAAT TTCAGTTTGT AAATTATCTG CGGGGAGGAG ACCTTGGATG GGGAGATTCA
CGTACGGTAA ACCGTGAATT TATTCAGAAT AATGTGCGTG CTGATAACGA AGAAGTAAAC
AATGTGTGGG TGGCAATTTA TAAAACCATC AACCTTACAA ACCACGTTCT TGCTCGTGTA
CCGGAGATAA ATGATATTAC AATGACGCAG GCAGACAGGA ACAGAATATT AGGCGAAGCA
TATTTTATCC GTGCGCTCTG TTATTTTGAT CTTGCAAGAA CATGGGGCGG TGTGCCATTG
ATTGTTAAGC CAAGTATAAA TGCAGACGAT ACAAAAGGTA TTACCAGAAG CAGTGTGTTT
GATGTATATA ATTATGTAGA AAAAGATCTG GAACAGGCAG AATTATTATT ACCTGACGGA
ACAAATCGAA TACGTGCAAC TAAAAAAACG GTATGGGCAT TGAAAGCGCG TTTCCATGCA
TACAGAAGTC AGTGGGGCTT AGCTGAATCA TATGCAACGA ATGTGATCAA TGATGCTGCA
AACTATACAT TGGTAAAACC GTTTGGCGCC TGGTTTCAGG CAAACGTGGT TGGTTCAAAA
GAATCTATTT TAGAAACTGC TTACAGTTCT GTACTTACCA ATACACACCG TAACTCCTGG
CTGCCGCCTG AACGCGGAGG TATCAGAAGC TGGTTCCCGG TAGATTCATT TGTTACACCA
ATGAATGACC CTACTATCGG CGGCACCAGA AAAGTTCTTA TTGCTAAAGC ATCAACAAAT
TTATGGTATG GGCAGTTGTA TTACCGCTCT CCTGCAACAG ATCCGTCTTA CATACTTCGT
GTAGCTGAAA TCTATTTGTT ACGTGCAGAA GCGCGCGCTG AACAGGAGAA TTACACCGGT
GCATCGGATG ATATTAATGC TGTAAGAGAT CGTGCAGATT TACCTGCTAT TGCAGTTACT
ACAAAAGAAG AAGCAATCTT AGCGATAGAG AAAGAGATAC GGTTTGAGTT TTTTGCAGAA
CCGCACCGTT TCTTTTATTT GGTACGTAAA GATTTGCTGG ATGATAAACT GAATATCACA
GATCCCAATA AAAACCTGTT ACCTATACCA AATCCGCAGA TTGTGGTAGA TCATTCACTC
GCACAAAATC CCGGATATTA A
 
Protein sequence
MNYIFKISAL LLLLSLLSCK KFLEVEPKDA VSDQITIVDK LSAETALNGA YRALASDAYY 
GQKFQFVNYL RGGDLGWGDS RTVNREFIQN NVRADNEEVN NVWVAIYKTI NLTNHVLARV
PEINDITMTQ ADRNRILGEA YFIRALCYFD LARTWGGVPL IVKPSINADD TKGITRSSVF
DVYNYVEKDL EQAELLLPDG TNRIRATKKT VWALKARFHA YRSQWGLAES YATNVINDAA
NYTLVKPFGA WFQANVVGSK ESILETAYSS VLTNTHRNSW LPPERGGIRS WFPVDSFVTP
MNDPTIGGTR KVLIAKASTN LWYGQLYYRS PATDPSYILR VAEIYLLRAE ARAEQENYTG
ASDDINAVRD RADLPAIAVT TKEEAILAIE KEIRFEFFAE PHRFFYLVRK DLLDDKLNIT
DPNKNLLPIP NPQIVVDHSL AQNPGY