Gene CHU_0484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0484 
Symbol 
ID4185469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp565135 
End bp565602 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content41% 
IMG OID638070490 
Producttranscription termination factor Rho 
Protein accessionYP_677112 
Protein GI110636906 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACAAA GAATTCAATC GCTACTCTTA CTTATTTGTG CTGCTGTGCT GATCGGCTGC 
CTGTTTACAC CCGCCTGGAA TGCTGTTTCT GACAATACTT CTTATGAGGT AAACTCCTTT
GCACTAACCA TTAGTCATGA AACCATTTCT ACGGACAAAA ATATTATTTT CATAGCAGCG
CTGGTTGCAC TAAGCATCTT TCTTACGTTT TTTATCATTT TCAAATACAA TAACAGACTG
CTTCAGATGC GCTTAAACAT GATGAATACC ATCCTGATCT GTCTGATCGA AGGCCTATAT
TTCTGGTACA TACGCGAAGC AAAAATATTA ATCGGCACAG CCGAATTCAC GGAAAAATTC
GGTCTGGCTT TTTACCTCCC TCTTGCAGCC CTGATCCTGT GTTTTATTGC AGGCAAGCGC
ATTCAGAAAG ACGAAGAACT GGTTAAGTCG GTAGACAGGA TACGCTAA
 
Protein sequence
MIQRIQSLLL LICAAVLIGC LFTPAWNAVS DNTSYEVNSF ALTISHETIS TDKNIIFIAA 
LVALSIFLTF FIIFKYNNRL LQMRLNMMNT ILICLIEGLY FWYIREAKIL IGTAEFTEKF
GLAFYLPLAA LILCFIAGKR IQKDEELVKS VDRIR