Gene CHU_0387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0387 
SymbolyadG 
ID4183448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp457740 
End bp458489 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content39% 
IMG OID638070395 
ProductABC transporter, ATP-binding protein; GldA-related gliding motility protein 
Protein accessionYP_677017 
Protein GI110636810 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.225863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.584755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAA TAACGAATCC TGCTATTACC ATATCTAACC TGTCTTTTCA CTACACTGAA 
AATTCAGGCG TTTATTTCAA TGATTTTAAT TTAACTGTTT TTGAAGGCGA ACGCTTTGGT
TTATTTGGAC CAAATGGTGC CGGCAAATCC ACCCTAATAA GCCTTATGAC AGGCTTGTTA
AAACCCGTAA GTGGCGTGGT GACTTTGTTC AATGAAGATA TCCATGCAAA GTGTACGCGG
AAATTATTCG GGTTTGTGCC GCAGGATTTC TCTCTGTATG ATGAATTAAG CCCGATCGAA
AATTTACAGT TCTTCGGTGC ATGGGCAGGC TTGTCTAAAA AAGAAATAAC AAACCGAACA
ACAGAGCTTC TGGATATATT AGGATTGACA GATGTTAAAC ATAAAGCAGT CAAAACTTTT
TCAGGAGGAA TGAAACGCAG GGTAAATCTG GCTATTGGTG TAATACACCA GCCCCGTATT
TTATTTTTAG ATGAGCCAAC CGTTGGTGTA GATATTCAGA CACGCCATGC GATTATTGAA
TATTTAAAAC AATTGAATAA AGCAGGTATG ACCCTTGTCT ATACCTCACA TCAGTTAGCC
GAAGCAGAAA GTCTGTGTAA CAGAATTGCA TTGATAGACA ATGGTCAACT GATTGCATGC
AATGACATTC CGGATCTGTT AGCCTCACAT CATGAAGAAG ACCTCGAATC CCTTTTCTTA
CACTTAACCG GTAAAGCATT TAGAGATTAA
 
Protein sequence
MAEITNPAIT ISNLSFHYTE NSGVYFNDFN LTVFEGERFG LFGPNGAGKS TLISLMTGLL 
KPVSGVVTLF NEDIHAKCTR KLFGFVPQDF SLYDELSPIE NLQFFGAWAG LSKKEITNRT
TELLDILGLT DVKHKAVKTF SGGMKRRVNL AIGVIHQPRI LFLDEPTVGV DIQTRHAIIE
YLKQLNKAGM TLVYTSHQLA EAESLCNRIA LIDNGQLIAC NDIPDLLASH HEEDLESLFL
HLTGKAFRD