| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0254 |
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| Symbol | lytT |
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| ID | 4185005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 306452 |
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| End bp | 307207 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638070264 |
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| Product | response regulator |
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| Protein accession | YP_676886 |
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| Protein GI | 110636679 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.437869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAATA AAATCAAAGC AATTATTATT GATGATGAAC CTGACGGGAG AACAGTTCTT
CATTCTCTGA TTAAAATATA TTGCCCTCAG ATAGATGTAC TCGGACAGTC GTGTTCCGGT
GAAGAAGGTT TATCTATGAT ACAGGACCTG AATCCGGAAC TGGTTTTTCT GGATATTGAC
ATGCCCGGAA TGAATGGGTT TTCGTTATTA AAAAGGCTGA AGGAAATTAC CTTTGAAGTA
ATTTTTGTAA CGGCACATCA TCATTATGCA CTCAAGGCAA TTAAACACAG CGCGCTGGAT
TACCTGTTAA AGCCCGTTGA TAAAACGGAG TTAATAGAAG CCGTAGAAAA ATTCATTAAG
CTGGATAAAG AAAACGTAAA TGAGCGCATG TCCTTTTTAT TAAAAAATGA ATCAAAGGAT
GCCTCAGAAA TTACTCAGAT TATATTAAAT GTACGCGAGG GATATATTTT TACCGATATA
GAAGACATTA TACGCTGCGA AGCAGATGGT AATTATACCA TGGTACATCT GAAAAATGGC
ACCAGACAAC TTGCCAGCAA AACGCTGAAA GAATTTGAAC ATATTTTAGG TCAGAATAAT
TTCTGGCGCA TTCATAAATC ACACCTGATC AATCTTAAAC ATTTAAAAAA ATATGTAAAG
GGAGATGGCG GCGGCAATGT TGTTATGACA GACAATTCTG AGATCGAAGT ATCCAGAAGA
AATAAAGACG CGTTTTTAAA ACAATTCAAT CTATAA
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| Protein sequence | MNNKIKAIII DDEPDGRTVL HSLIKIYCPQ IDVLGQSCSG EEGLSMIQDL NPELVFLDID
MPGMNGFSLL KRLKEITFEV IFVTAHHHYA LKAIKHSALD YLLKPVDKTE LIEAVEKFIK
LDKENVNERM SFLLKNESKD ASEITQIILN VREGYIFTDI EDIIRCEADG NYTMVHLKNG
TRQLASKTLK EFEHILGQNN FWRIHKSHLI NLKHLKKYVK GDGGGNVVMT DNSEIEVSRR
NKDAFLKQFN L
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