Gene CHU_0230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0230 
Symbol 
ID4185531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp280183 
End bp280716 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content35% 
IMG OID638070240 
Producttwo-component sensor histidine kinase/response regulator 
Protein accessionYP_676862 
Protein GI110636655 
COG category[T] Signal transduction mechanisms 
COG ID[COG3292] Predicted periplasmic ligand-binding sensor domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.949413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.193124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTGCTA TCACTTTTGA TAACGCTGGC AATGGCTGGT TTGGAACAAA TTACGGAATT 
TCAAAATTTG ATGGCACTTC AACGTGGTCA GAATATAATG AAATGAATTT GTCACTCATC
GGATATAATT ACCAAACAAT AAAATCAATT GCTGTTGAAT CCAATGGAAC AAAATGGTTT
GGTGCAAATT CAGGTGCGGG AGTATACATA TTTAATGATG TGGATTGGAC GTATCTAAAC
TCAAATAATA GCGGATTAAA AACCTCAGGT TATGTAACGT CTATCGTTAC TGACTCAAAA
GGAATTGTAT GGTTAGGTTT AAATTTTGGT GGAGTTGCTA AATATGACGG AAAAACTGTG
ACTACCTATA CAGCACTCAA TAGTAATCTT GTTTCATCCA ATGTAACGTC TTTATGTTTT
GACTCTGAAG AAAATTTATG GGTAGCAACA CAAGGTGGTA TCAGCAAATT TGATGGTACA
AACTGGACTA CTTATTTATC AGGACAATTA ATCAATGCTG TTACGGTAGA ATAA
 
Protein sequence
MFAITFDNAG NGWFGTNYGI SKFDGTSTWS EYNEMNLSLI GYNYQTIKSI AVESNGTKWF 
GANSGAGVYI FNDVDWTYLN SNNSGLKTSG YVTSIVTDSK GIVWLGLNFG GVAKYDGKTV
TTYTALNSNL VSSNVTSLCF DSEENLWVAT QGGISKFDGT NWTTYLSGQL INAVTVE