Gene CHU_0201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0201 
Symbol 
ID4185306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp247376 
End bp248446 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content37% 
IMG OID638070210 
Producta-glycosyltransferase 
Protein accessionYP_676833 
Protein GI110636626 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACAAA AAATACTGCA TATTATTGAT TCATTCTCCA CAGGCGGAGC TGAAGTTTTA 
TTGGCAGGGG TTATACCTGA GCTAGTTGAT TTTGAGCATG TGATTGTGTA TTTAACCCCG
ACAAAAACAC CAATTCTCTC TTCCGATCCA ACGATTAAAA TTGTCTGTCT GAACTTTCGA
AGCATTACAG ATGCCACAAG AATCATCAAA GATCTGAATA CAATAATCGA GCAGGAAAAG
CCTGGCATCA TTCATACCCA TTTATATTTC TCTTCACTTT TTATTCGCTT TGCCCGCACG
AATAAGATCA ACATCATTCA AACATATCAT AACGAATATT ACAGAATCCG CTATCCGCAA
TTCTCTGCCC GTATTAAAAA AATCGGTTTA AAATTACTGG ACCGGTTTAC GATGAAAAAC
GCGTATACGG TTATTCACGT ATCAAAGGCA CAGCAGCTGG TCAATGACCA TGATGTACGT
ATTAAGTCAA GCGCTGTTCT CTATAATTAT GTAGAAGATC AATTTTATCA GACCCGTAAA
ACGTCTTCAT TTAAGGGTAC AGGCAAACTT AAAATAATCT GTGTAGGAAA TCTGAAAACA
GAAAAAAATC ACATTCTCCT TTTACACGCG CTAAGGCAAT TAATGCATTT GCCCATACAT
GTAACTATTT GTGGTGAAGG AAATGATTAT ATTATGCTCC AGAAATACAT CAACCGATAT
GATCTTCCGG TAACATTAAT GGGCAGCCAA AAAAACATTC ATGAACTGCT GGGTCAGCAT
GATCTATTTG TCTCCTGCTC TATTATCGAA GGCTTCGGGA TCAGTATTGC AGAAGCAATG
GCATCTGAAA TACCGTTAAT CATTTCAGAT ATTTCAACCT TTAAAGAAGT AACGCAGAAC
AAAGCTGTTT TTTTTGAATC CCGGAATGTA GCATCGCTGG CTGAAAAAAT CGAACAATTT
TATTTATCTC CGCAATCTGC TGCGGCTTCG GTACTCGCTT GCAAAGAGAT TGCAGAGCAA
TACAAAAAAA GTTTTTACCT CGACAGGTTA AACACACTCT ATAAAAAATA A
 
Protein sequence
MKQKILHIID SFSTGGAEVL LAGVIPELVD FEHVIVYLTP TKTPILSSDP TIKIVCLNFR 
SITDATRIIK DLNTIIEQEK PGIIHTHLYF SSLFIRFART NKINIIQTYH NEYYRIRYPQ
FSARIKKIGL KLLDRFTMKN AYTVIHVSKA QQLVNDHDVR IKSSAVLYNY VEDQFYQTRK
TSSFKGTGKL KIICVGNLKT EKNHILLLHA LRQLMHLPIH VTICGEGNDY IMLQKYINRY
DLPVTLMGSQ KNIHELLGQH DLFVSCSIIE GFGISIAEAM ASEIPLIISD ISTFKEVTQN
KAVFFESRNV ASLAEKIEQF YLSPQSAAAS VLACKEIAEQ YKKSFYLDRL NTLYKK