| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0128 |
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| Symbol | secA |
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| ID | 4184069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 152953 |
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| End bp | 156309 |
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| Gene Length | 3357 bp |
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| Protein Length | 1118 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638070131 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_676761 |
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| Protein GI | 110636554 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit
[TIGR01145] ATP synthase, F1 delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0813165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGGCA TTTTAGCAAA ATTATTCGGT ACAAAATCTG GTCGTGATAT TAAAAAATTA
CAGCCTTTAG TTGAACGCAT CAATGAAGAG TTTCAAAAAC TTCATGCATT AGATGACAAC
CAGTTGCGCG CGCAAACAGA TAAGATTAAA GGAATTATTG ACGCTGATTT GAGCGGGATA
GATAAACAGA TAAAAGAGCA TCACGATAAA ATTGCTGCTA ATCCGGATTT ATCTATTGAT
GAAAAGGAAG TTGTATTTCA GGCAATTGAT AAGCTTGAAT TAGAAAGAAA CAAAGAACTT
GAGAAAGTTT TAGAAAAAGT ATTGCCTCAG GCATTTGCAG TAGTTAAAGA TACAGCACGC
AGATGGAAAG AAAACGGTAA GCTTACTGTA ACAGCAACGC CGATGGACAT TGAACTTGCT
TCTAGAAAGA AGAACGTTCA GATTATTGGC AGCACGGCTG AGTGGAGCAG CAAATGGCTT
GCTGCCGGTA CAGAAGTTAC CTGGGAAATG CAGCACTTTG ATGTGCAGCT TATTGGTGGT
ATGGTTTTGC ATCACGGAAA AATTTCTGAG ATGGGAACAG GGGAAGGTAA AACACTTGTA
GCAACCTTAC CTGCTTACCT GAATGCATTG GCGCGCAGAG GCGTACACGT GGTTACTGTC
AACGACTATC TTGCAAAACG TGATAGTGAG TGGATGGCTC CGTTGTTCGA ATTCCACGGC
ATCTCTGTAG ATTGTATTGA TAAATATCAG CCAAACTCAG AAGAGAGAAG AAAAGCTTAT
CGTGCTGACA TTACATACGG AACAAACAAT GAATTCGGCT TCGATTACCT GCGCGACAAT
ATGGCGACAG ATAAAGATGA TCTTGTTCAG CGTGGGCACC ATTATGCAAT GGTCGATGAG
GTCGATTCAG TATTGATTGA TGATGCACGT ACGCCTTTGA TCATTTCAGG ACCGGTACCA
AAAGGCGACC AGCACGAGTT TGCAGAATTA AAACCACGTA TTCAGCGTGT ACTGGAAGAG
CAAAAGAAAT TAATCAATAC GTATTTAGTT GAAGCGAAAA GATACATTGC AGCAGGTAAA
GAAAAAGAAG CCGGACTGGA ATTGTTGCGC GCGCACAGAG GATATCCCGG TTACAAGCCG
TTGATCAAAC AATTAAGTGA AACAGGTATC AAATCCATTT TGCAGAAAAC GGAAAATGAA
TACATGGCAG AAAACAACAA ACGTATGCCA GAGGTTGATC TTCCATTGTA TTTTGTAATT
GATGAAAAAC ACAATCAGGT TGACTTTACT GAAAAGGGTG TTGACTTTAT CACAGGTGAA
CAGGAGGATC CAACCTTATT CGTACTTCCG GATATCGGTT CTGAATTAGC GAAGATTGAA
AAAGATAAAT CTATCTCTGA TCAGGAACGT ATGGAGCAAA CAGAAAAGTT GTTGAGTGAT
TATTCAATCA AGCAGGAACG TATTCATACA CTTCAGCAGT TATTAAAAGC ATATACCTTA
TTCGAAAAAG ATACCGATTA CGTAATCATG GACGGAAAGG TTAAAATCGT TGATGAGCAG
ACTGGCCGTA TCATGGATGG TCGCCGTTAT TCAGACGGTT TACACCAGGC ACTTGAAGCA
AAAGAAAATG TGCGTGTAGA AGAAGCAACA CAAACCTACG CAACCATCAC ACTGCAAAAT
TATTTCCGTA TGTACCACAA GTTGTCTGGT ATGACAGGTA CAGCCGAAAC AGAAGAAGCA
GAATTTCAAC AGATCTACAA TCTGGATGTT GTTGTTGTTC CTACAAACAG ATCTATTGCA
CGTTTAGATG AGCAGGATAA AGTTTATAAA ACAACTAGAG AAAAATATAA TGCCGTTGCA
GACGAGATTG TAGAATTAAC AGAAAAGGGC AGACCTGTCC TGGTTGGTAC TACGTCTGTA
GATATTTCTG AATTATTGAG CAGAATGCTT AAGATGCGTA ATATTAAGCA TCAGGTATTG
AATGCAAAAC TACACGCGAA AGAAGCCGAC GTTGTTGCAG AAGCAGGGAA GCCGGGCACG
GTAACAATTG CTACCAACAT GGCTGGTAGA GGTACAGATA TTAAATTAAC TGCAGAAGCA
AAAGCTTCAG GCGGTTTAGC AATCATAGGT ACAGAACGTC ATGAATCAAG ACGTGTAGAC
AGGCAGCTTC GTGGTCGTGC CGGTCGTCAG GGTGACCCGG GCTCATCTCA GTTCTTTGTC
AGTTTGGAAG ACAACCTGAT GCGGTTATTC GGTTCTGACC GTATTGCTAA GTTCATGGAT
CGTATGGGGT ATAAAGAAGG TGAAGTAATT CAGCATTCTA TGATTTCAAA TTCGATTGAA
CGTGCACAGA AAAAAGTTGA AGAAAATAAC TTTGGACAAC GTAAGCGTTT GCTTGAATAC
GATAACGTAA TGAATTCTCA GCGTGTTGTA ATTTACAAAA GACGCAAGAA CGCATTGTAT
GGTGAGCGTT TGAAACTTGA TATCCTGAAC ATGATCTTTG ACTTATGCGA AGACATGGTT
TTCGGCGCAT ATACTACTAA AAATTACGAC AACTTTAAAT TACGCTCAAT AAGTGTATTC
GGAGTAATTC CTGATATTAC CGAAGAAGTA TTTAACAAAG CTACAGCAGA AACATTAGTT
AAGTCGTTTT ATGAAGAAGT GCTGGCACAC TACGAACAGA AAATAAAGTT TGTAAAAGAA
AAAACGCAGC CAACATTTAA TGAATTGCAA TTGACACGTG GCGAAACAAT TGAAAATATT
GTAATTCCAT TTACAGATGG TAAACGTAAC ATCAATATTA TTGCACCGCT TAAAGAATTG
GCACAAAGCG ATTCCCGTGC ACTGGAACAA GCGATTGAGC GTTACATTAC ACTTGCTGTA
ATTGATATGC ACTGGAAAGA TCACTTGCGT GAAATGGACG AATTGAAACA GTCTGTACAA
AATGCAGCTT ATGAACAAAA GGATCCATTA TTGGTATACA AATTTGAAGG GTTTGAGTTG
TTCAAGAAAT TCGTTTATAC AGTAAATGCA GATATCGTTT CATTCTTATT CAAGGCAGAT
ATTCCTAAGC AGGATACGGT TCCGGTTAGA GAGCTGAAAC AGCAGCCTGT ACAGCAGCCG
AAATACAGAG AGACTAAAGA TGAAGCTGGA TCAGCTTTCG GAGGCGGAAA CGCAAATCAG
CAAGTTGAAG AAGCTGTTGC ACCGCCCAAA GCAGAGCCGC TTCGTTCGCA GAAAATCGCA
AACAGAAACG ATAAAGTATC TGTACAGTAC ATGGATGGCA GTGTAAAGCG TGACATAAAA
TACAAAGCAG TTGAAGACGA TTTATTAAGC AATAAGTGTG TGTTAATTGA AGAATAA
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| Protein sequence | MLGILAKLFG TKSGRDIKKL QPLVERINEE FQKLHALDDN QLRAQTDKIK GIIDADLSGI
DKQIKEHHDK IAANPDLSID EKEVVFQAID KLELERNKEL EKVLEKVLPQ AFAVVKDTAR
RWKENGKLTV TATPMDIELA SRKKNVQIIG STAEWSSKWL AAGTEVTWEM QHFDVQLIGG
MVLHHGKISE MGTGEGKTLV ATLPAYLNAL ARRGVHVVTV NDYLAKRDSE WMAPLFEFHG
ISVDCIDKYQ PNSEERRKAY RADITYGTNN EFGFDYLRDN MATDKDDLVQ RGHHYAMVDE
VDSVLIDDAR TPLIISGPVP KGDQHEFAEL KPRIQRVLEE QKKLINTYLV EAKRYIAAGK
EKEAGLELLR AHRGYPGYKP LIKQLSETGI KSILQKTENE YMAENNKRMP EVDLPLYFVI
DEKHNQVDFT EKGVDFITGE QEDPTLFVLP DIGSELAKIE KDKSISDQER MEQTEKLLSD
YSIKQERIHT LQQLLKAYTL FEKDTDYVIM DGKVKIVDEQ TGRIMDGRRY SDGLHQALEA
KENVRVEEAT QTYATITLQN YFRMYHKLSG MTGTAETEEA EFQQIYNLDV VVVPTNRSIA
RLDEQDKVYK TTREKYNAVA DEIVELTEKG RPVLVGTTSV DISELLSRML KMRNIKHQVL
NAKLHAKEAD VVAEAGKPGT VTIATNMAGR GTDIKLTAEA KASGGLAIIG TERHESRRVD
RQLRGRAGRQ GDPGSSQFFV SLEDNLMRLF GSDRIAKFMD RMGYKEGEVI QHSMISNSIE
RAQKKVEENN FGQRKRLLEY DNVMNSQRVV IYKRRKNALY GERLKLDILN MIFDLCEDMV
FGAYTTKNYD NFKLRSISVF GVIPDITEEV FNKATAETLV KSFYEEVLAH YEQKIKFVKE
KTQPTFNELQ LTRGETIENI VIPFTDGKRN INIIAPLKEL AQSDSRALEQ AIERYITLAV
IDMHWKDHLR EMDELKQSVQ NAAYEQKDPL LVYKFEGFEL FKKFVYTVNA DIVSFLFKAD
IPKQDTVPVR ELKQQPVQQP KYRETKDEAG SAFGGGNANQ QVEEAVAPPK AEPLRSQKIA
NRNDKVSVQY MDGSVKRDIK YKAVEDDLLS NKCVLIEE
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