Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0112 |
Symbol | |
ID | 4185942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 135400 |
End bp | 137580 |
Gene Length | 2181 bp |
Protein Length | 726 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638070114 |
Product | Fe-S oxidoreductase |
Protein accession | YP_676745 |
Protein GI | 110636538 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.702038 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGATAT CCTTATTCAT ACCGCCCTTA ACGCAGATAA ATACGCCATA TCCTGCAACA GCCTACCTGA AAGGGTTTCT GAATGAGACA GTATATACGG ATTGTACACA ATCAGATCTG GGTCTGGAGC TGATCCTTGG CATCTTTAAT AAAAAAACAC TTGTTCAATT GTTTGACGAA GCATCTTTGA AAAAAGATCT GTCGCCCAAT GTGCAGCACA TTTTAAGTCA GCGCGATCGT TATGCGTTTT GTGTAGATGC CGTCATTCGT TTTCTGCAAA ATAAAAATAT AACACTTGCG CATAAGATCT GTGCAGGTGA TTATCTTCCG CAGGCTTCAC GTTTCGAAGC ACTGAATGAA GAAGTTGAAT GGCTGTTTGG AAGCATGGGT ATACACGACA AAGCTAAAAT GCTTTGCACG CTGTTCATTG AAGATATCGG AGACTTGATC ATCGAATGCA TTTCACCCTA TTTTGGATTC AGTAGGTATG CAGAAGACAT TGCACGCTCA GCAACATCGT TTGACCCATT GCTTAAATTA CTGGAAGAAA AAAATAATAG TATTGACTCA ATATTGGTTT CCATCGTTGA TAAACATATT GAACTTGAAC GGCCTGATAT TGTAATTTTT ACAATTCCTT TTCCGGGAAA TGTTTATGGC GCATTCAAAG CGGGGCAACA CATAAAGAAA ATATATCCGC ATATAAAAAT TGCGATGGGA GGCGGTTTTC CTAACACAGA ACTGCGTAGC CTGACAGATG CACGAGTATT TGACTTTACA GATTTTATCT CACTGGATGA TGGCGAAAGA CCAATACTTA ATATACTGGA ATATTTAGAA GGCAAAAGAG AAAAAGCCTT ATTGAAGCGC ACATTCATTC GTGAAGCAGG GCAAGTCATG TACATCAATG GCTGTAAGAT GCCGGATATA GCCCATAGCA AAACGGGAAC ACCGGATTAC ACGGGCTTGT TGTTGGATGG ATACATTTCG ATGCTTGAAA TGGCAAACCC TATGCACCGA TTATGGAGTG ACGGACGGTG GAACAAAATA ACCGTGGCTC ATGGCTGTTA CTGGAAGAAA TGTTCTTTCT GTGATATTTC ATTGGATTAC ATCGGCCGGT ATGAACCTGC AGCAGCGAGT GTGCTGGCCG ACAAGATCGA AACCATTATT GCACAAACAG GTACTACAGG CTTTCACTTT GTAGATGAAG CCGCACCGCC TTTAGTAATG CGTGATTTAG CGCTGGAAAT TTTAGATCGC AAACTGGATA TTTCCTGGTG GGCAAACATT CGTTTTGAAA AAACATTTTC AGACGACTTA TGTAAACTGC TTGCAGCTTC TGGTTGCATT GCGGTTACTG GAGGGTTGGA AGTAGCGTCG GATCGGCTAT TACAGATGAT GGAGAAAGGT GTGAGTGTGG CGCAGGTCTC TCAGGTTGCA TCAAACTTTA CACAGGCAGG CATCATGGTA CATGCCTATC TGATGTTTGG ATTTCCAACA CAAACGGCAC AGGAAACAAT TGACTCACTT GAAGTGGTTC GTCAGTTGTT TGAAGCACGT GTACTGCAGT CGGGCTTCTG GCATCGTTTC TCTATGACTG CACACAGTCC TGTTGGATTA AATCCGGAAA AATACCAGGT AATAAAGATC GGGCCGGAAC AGGGTAGCTT TGCAAATAAT GATCTGATAC ATGAAGACCC GAAAGGCTGC GATCATGACC TGTTTGCAGA AGGTTTGCGC AAATCCTTAT ATAATTTCAT GATGGAAAAT TGTCTGGATT GGCCTGTGCA GGATTGGTTT GAGTTTAAAA CTCCCAAAAC CACTTTGCAG CCAACGCTCA TACAAAGCCA TATTAATGAA GGTTCAGGCG AAGATGAAAC GAAGCTTGCG TATAAAATTT GTTGGGTTGG CAATATGCCA ACCTTTACAA CCCAAGGGAA AAATGTTAAG ATTGTCATTG AAACGCCCCA TGGAATGCTT ATTACTAAGC TTGATGTAAA ATCCGCAAAT TACCTGGAGT ATACATTACA GACAATATTA AAATCACATA AATCGCTGCT TGTGCTCTCC GATTTTTTAA AAGAATACAG TGTACAAACA AACTTACCGG AGGAACAATT GTTGCATTCA GAAACGTGGA GTGCGATAAG GAGCGCTGGA TTGCTGCTGA TACGGTTTTA A
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Protein sequence | MKISLFIPPL TQINTPYPAT AYLKGFLNET VYTDCTQSDL GLELILGIFN KKTLVQLFDE ASLKKDLSPN VQHILSQRDR YAFCVDAVIR FLQNKNITLA HKICAGDYLP QASRFEALNE EVEWLFGSMG IHDKAKMLCT LFIEDIGDLI IECISPYFGF SRYAEDIARS ATSFDPLLKL LEEKNNSIDS ILVSIVDKHI ELERPDIVIF TIPFPGNVYG AFKAGQHIKK IYPHIKIAMG GGFPNTELRS LTDARVFDFT DFISLDDGER PILNILEYLE GKREKALLKR TFIREAGQVM YINGCKMPDI AHSKTGTPDY TGLLLDGYIS MLEMANPMHR LWSDGRWNKI TVAHGCYWKK CSFCDISLDY IGRYEPAAAS VLADKIETII AQTGTTGFHF VDEAAPPLVM RDLALEILDR KLDISWWANI RFEKTFSDDL CKLLAASGCI AVTGGLEVAS DRLLQMMEKG VSVAQVSQVA SNFTQAGIMV HAYLMFGFPT QTAQETIDSL EVVRQLFEAR VLQSGFWHRF SMTAHSPVGL NPEKYQVIKI GPEQGSFANN DLIHEDPKGC DHDLFAEGLR KSLYNFMMEN CLDWPVQDWF EFKTPKTTLQ PTLIQSHINE GSGEDETKLA YKICWVGNMP TFTTQGKNVK IVIETPHGML ITKLDVKSAN YLEYTLQTIL KSHKSLLVLS DFLKEYSVQT NLPEEQLLHS ETWSAIRSAG LLLIRF
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