| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1647 |
|---|
| Symbol | glyA |
|---|
| ID | 5408323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | + |
|---|
| Start bp | 1569178 |
|---|
| End bp | 1570425 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640871317 |
|---|
| Product | serine hydroxymethyltransferase |
|---|
| Protein accession | YP_001407170 |
|---|
| Protein GI | 154149300 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAATT TGGAAAATTT TGATAAAGAA ATTTTTGATT TAACAAACAA AGAGTTACAA
AGACAATGTG ATTATTTGGA AATGATTGCA AGTGAAAATT TCACATATCC TGAAGTTATG
GAAGTAATGG GTTCTATACT TACAAACAAA TATGCTGAAG GATATCCAGG TAAAAGATAT
TACGGTGGTT GCGAATTTGT AGATGAAATA GAGCAAACAG CAATTGATCG TTGCAAAAAA
CTTTTCGGCT GCAATTTCGC AAATGTCCAA CCAAATAGCG GAAGCCAAGC TAATCAAGGT
GTTTACGGAG CTTTTATAAA ACCGGGCGAT AAAATTTTAG GTATGGATTT AAGTAACGGC
GGACACTTGA CTCATGGCGC AAAAGTAAAT GCAAGTGGTA AATTTTATAG CAGCTTTTTT
TACGGCGTGG AAATGGACGG AAGAATAGAT TATAACAGAG TTGCTGATAT TGCTAAAATC
GTAAAACCGA AACTAATCGT TTGCGGCGCA AGCGCATATC CAAGAGAGAT TGATTTTGCA
AAATTCAGAG AAATCGCAGA TAGCGTCGGA GCATTTTTAT TTGCAGACGT AGCTCATATA
GCAGGTCTTG TAGTTGCCGG AGAGCATACA AATCCGTTTC CATATTGCCA CGTAGTAAGC
TCTACAACAC ATAAAACTTT AAGAGGTCCT AGAGGCGGAA TTATTATGAC AAATGAAGAA
GAATTTGCCA AAAAAATCAA CTCAAGCATT TTCCCAGGAA TGCAAGGCGG CCCGCTTGTC
CATGTTATCG CAGGAAAGGC GGTCGGTTTT AAACATAATT TAAGTCCTGA ATGGAAAACT
TATGCAAAAC AGGTAAAAGC AAATTGCAAA ATTTTAGGTG ATACGCTAAT GAAACGCGGC
TTTGATTTGG TAAGCGGCGG AACGGATAAT CACTTAATTT TAGTTAGCTT TTTGAAAAAA
GATTACAGCG GAAAAGACGC AAGCAACGCG CTTGAAAATG CAGGAATTAC CGTAAATAAA
AATACGGTTC CTGGAGAAAC AAGAAGCCCC TTTGTAACAA GCGGCATTAG AGTAGGAAGC
GCAGCTCTTA CATCACGCGG TATGAAAGAA AAAGAATTTG AATGGATTGC AAATAAAATT
GCCGATGTGC TTAATGATAT AAACAATACT TCACTTCAAA GTAAAATAAA AGCCGAAGTT
AAAGAACTTG CAAGTAAATT TATTATTTAT GATAAAGCTA TGTTTTAA
|
|---|
| Protein sequence | MSNLENFDKE IFDLTNKELQ RQCDYLEMIA SENFTYPEVM EVMGSILTNK YAEGYPGKRY
YGGCEFVDEI EQTAIDRCKK LFGCNFANVQ PNSGSQANQG VYGAFIKPGD KILGMDLSNG
GHLTHGAKVN ASGKFYSSFF YGVEMDGRID YNRVADIAKI VKPKLIVCGA SAYPREIDFA
KFREIADSVG AFLFADVAHI AGLVVAGEHT NPFPYCHVVS STTHKTLRGP RGGIIMTNEE
EFAKKINSSI FPGMQGGPLV HVIAGKAVGF KHNLSPEWKT YAKQVKANCK ILGDTLMKRG
FDLVSGGTDN HLILVSFLKK DYSGKDASNA LENAGITVNK NTVPGETRSP FVTSGIRVGS
AALTSRGMKE KEFEWIANKI ADVLNDINNT SLQSKIKAEV KELASKFIIY DKAMF
|
|---|
| |