| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1335 |
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| Symbol | |
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| ID | 5408379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | - |
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| Start bp | 1267286 |
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| End bp | 1270339 |
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| Gene Length | 3054 bp |
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| Protein Length | 1017 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640871012 |
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| Product | CcmF/CcyK/CcsA family cytochrome c biogenesis protein |
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| Protein accession | YP_001406884 |
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| Protein GI | 154149248 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.927141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAAT TTTTTAAAAA TTTTTTCAGC ATAGGTTTTG CCTGTGTCAT GTTTATAGTT
TTTGCTTTTG CATGTGCGCT TGCTACGATT ATTGAAACAG TTTTCAACAC GGATACCGCA
TGGGCTTATG TATATGGTAC AAGTTGGTTT GGACTTATAA TGGTAATTTT AGGCATAAAC
TTAGCTTATA ATCTATATCG CTACAATATG GCAAGAGCAA AAAAACTGCC GTCTTTTTTA
TTTCATTTCG GCTTTATTTT TATTTTACTG GGCGCCGTTA TTACCAGATA TTTTGGATTT
GAAGGTTCTA TGCATATAAG AGAAAACGAG CAAAGTAATG TCGTTTCAAG CCGTGAAGTT
TATATGCAGC TGATTAGCAC AAATGAAAAA GGCGATAAAA TTTCTACGGA TTTAAATCAA
TACGTATCTA CAAAAGGTAA AAATAAATTT GATATGAAGC TTGAAATTGA TGGCAAAACC
GCAACTTTAA GTTATAAAAA ATTTATATTA AACGGAATTG AAAGTTATGT AAATAAAGAG
GGTGGAACTC CACGCGCGGA AATTTTATTC AGTGATGGTA AAAATCGTCG TACGATAGCA
TTTAAAAATA ACGATTCAGT TGAAATCGGC GATGTAAGTT TTACTTTTAA TGAAGCACCT
AAACAATCCA AGTTTATAAG TATAATTTTA AAAGACGGAA AATTTTATCT TAAAACAAAT
CAACAAATTT ATGCTGTAAA AATGAGTGAT TCTAGTAAAA CGTTACTTCC TTTAAATATC
GATGTGGAAA TGGGCGAACT TAGCTTTTAT AATTATGAAG GTTTGAATTT TTCAGCAGTT
TCGCTTTTGA GTTCCGCTGT GAAAGGTATA AAAGAGGTAA ATCAAAAAAA TGGCGGAAAT
AATGTAATAA TCGCAAATCT AAACTATAAT GGAGAAGATA AGGAAGTGTA TATGCTTTTT
GGTGAAAATC CGCGAAATTT CAGTGTAGGC GGAAAGAATT TCGAGCTTGC ATGGGCACCG
AAACTTTTTC ATTTGCCGTT TTATTTAAAA CTTAAAGATT TTAAACTTGA CAGATATCCC
GGATCAAATT CTCCAAGCGG TTACAGTAGT GAAATTTCGG TTATTTCAGA AAATGAAAAT
TTTGATTATG AAATTTTTAT GAATCACGTG CTTGATTACG CAGGATACAG ATTTTTTCAA
AATTCATACG ATATGGATGA GATGGGAACC ATACTTTCAG TAAATAGAGA TCCTGGAAAA
ATGCCTACAT ATCTTGGATA TATTTTGCTT TGTCTTGGTA TGTTTTTAAA TTTTTTCAAT
CCTAATTCAC GCTTTACCAA ATTGTCTCGC CTTATAAATA ATGCCAAAAT TTCATCTTTT
GCATTGATTT TTTGCGCTTT ATTCGCCACA AATGCAATAA GTTCAGAACT TCCAAAAATC
GATGAAAATC ACGCTAAAAA TTTAGGTTCT CTTATCGTAC AGGGATTTGA CGGTAGAATG
GAGCCGTTCG ATACGGCGGC AAGAGACTTG CTGAATAAAA TTCACAGAAG TGACAGTTTT
GTTGACGGAA TGTCACCAAA CGCTACGATG CTATCGATGA TGATACATCC TGAATACTGG
GAACAAGCTG AAGTCATCAA AGTAGATAAT GATGAACTTA AAAAAATTCT TGGTATGGAT
AAATCGCGTA AATATGCAAA AATCGGTGAT TTTTATAATG AAAATAGAGA ATACAAGCTT
CAAAAATTAA GCGAAGAAAT CAACCGAAGG CCACCTGGAA ATCGTTCTCA ACTTGATAAA
GAGATATTGA AAGTCGATGA AAGATTAAAT ATTTTTTATA ATATTTTAAT GACTGAAATG
TTTCGTTTCA TACCGAAACA AAAGGGTGAA AACAATGAAT GGTTTTCTCC TGTAAAAGCT
ATGATATATT TTGATAAAAA TGAAAGCGAG CACGTAAGTA AAGTGTTAAG TGGATATTTT
ACTAGTGTCT TAATGGCTGA GAAAGACGGT GATTGGAAAA AAGCTGATTT GGCGCTTGAA
AAATTAAAAG AGTATCAGCA AAAAGTCGGC GCAGATGTTA TGCCGTCAAA AAATGTCGTC
AATTTCGAAC TGTTTTTCAA CAAAGCCAAA ATTTTTGAGC GTTTGATGCC TGTTTATTTA
ATTACCGGAC TTATTTTGCT CGCGCTTGTT TTTACGCGTC TGATGAAACC GGGACTTCAA
ATTTCAAAAG CTTTTGAAGC TGTTTATACC GTAAATATTT TGGCTTTTAT TATCCATACG
ATAGGGCTTG CGATTAGATG GTATATTTCA GGACATGCGC CTTGGAGTAA CGCCTACGAA
TCTCTTGTAT ATATAGCGTG GGCACTAAGC CTGAGCGGAA TTATTTTTTC AAAAACTTCA
GCTCTATCTC TTGCTTTAAC TTCTATTTTA GCAGGAATTA CGCTGTTTGT AGCGCACCTT
AGTATGATGG ATCCGCAAGT CGGCACAATT ATGCCGGTTC TTAAATCTTA TTGGCTTACA
ATCCATGTAT CGGTAATCAC TGCAAGTTAC GGATTTTTGG GACTTTGTTG GCTGCTTGGA
ATTTTTACGT TGCTGCTTTT TATAATTCAA AGCAAGAAAC CGAACGATCA AATTATAAAT
GCCATAAACG AAGCTACGCA TATAAATGAA ATGTCTATGA TTTTCGGGCT TAGTTTATTA
ACTGTAGGAA ATTTTCTTGG CGGCGTTTGG GCGAATGAAA GCTGGGGACG ATATTGGGGT
TGGGATCCGA AAGAGACTTG GGCATTAATT ACAATTTTGG TTTATGCAGC GGTTTTACAT
TTTAGATTTA TTCCTAGACT CAATTCTCAA ATCGCTTTTG CTATCGCTTC CGCTTTTGCT
TATTCAAGCG TGATCATGAC ATATTTCGGG GTGAATTTTT ATCTAACCGG AATGCATAGT
TATGCAAGCG GTGAAAAAGT TCCGGTGCCT ACTTCTATAT GGGTGATCGG TCTTACGATT
ATCGTTTTAA GTATTCTTGC ATTTCGCAAA CGTCGTTTTT CCGGCAGATT ATAA
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| Protein sequence | MNQFFKNFFS IGFACVMFIV FAFACALATI IETVFNTDTA WAYVYGTSWF GLIMVILGIN
LAYNLYRYNM ARAKKLPSFL FHFGFIFILL GAVITRYFGF EGSMHIRENE QSNVVSSREV
YMQLISTNEK GDKISTDLNQ YVSTKGKNKF DMKLEIDGKT ATLSYKKFIL NGIESYVNKE
GGTPRAEILF SDGKNRRTIA FKNNDSVEIG DVSFTFNEAP KQSKFISIIL KDGKFYLKTN
QQIYAVKMSD SSKTLLPLNI DVEMGELSFY NYEGLNFSAV SLLSSAVKGI KEVNQKNGGN
NVIIANLNYN GEDKEVYMLF GENPRNFSVG GKNFELAWAP KLFHLPFYLK LKDFKLDRYP
GSNSPSGYSS EISVISENEN FDYEIFMNHV LDYAGYRFFQ NSYDMDEMGT ILSVNRDPGK
MPTYLGYILL CLGMFLNFFN PNSRFTKLSR LINNAKISSF ALIFCALFAT NAISSELPKI
DENHAKNLGS LIVQGFDGRM EPFDTAARDL LNKIHRSDSF VDGMSPNATM LSMMIHPEYW
EQAEVIKVDN DELKKILGMD KSRKYAKIGD FYNENREYKL QKLSEEINRR PPGNRSQLDK
EILKVDERLN IFYNILMTEM FRFIPKQKGE NNEWFSPVKA MIYFDKNESE HVSKVLSGYF
TSVLMAEKDG DWKKADLALE KLKEYQQKVG ADVMPSKNVV NFELFFNKAK IFERLMPVYL
ITGLILLALV FTRLMKPGLQ ISKAFEAVYT VNILAFIIHT IGLAIRWYIS GHAPWSNAYE
SLVYIAWALS LSGIIFSKTS ALSLALTSIL AGITLFVAHL SMMDPQVGTI MPVLKSYWLT
IHVSVITASY GFLGLCWLLG IFTLLLFIIQ SKKPNDQIIN AINEATHINE MSMIFGLSLL
TVGNFLGGVW ANESWGRYWG WDPKETWALI TILVYAAVLH FRFIPRLNSQ IAFAIASAFA
YSSVIMTYFG VNFYLTGMHS YASGEKVPVP TSIWVIGLTI IVLSILAFRK RRFSGRL
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