Gene CHAB381_1123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_1123 
Symbol 
ID5408531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp1058823 
End bp1059692 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content33% 
IMG OID640870806 
Productferrous-iron efflux pump FieF 
Protein accessionYP_001406679 
Protein GI154148165 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00791465 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGTA AATTAAATGC ACCTAAAATT GCAGGAATTA CGGCTTTTTG TCTTGGCGGC 
GTCAAACTTG CAGCAGGGCT TATCAGCGGT TCTGTGGCGG TTATAAGCTC AGCGATTGAT
TCTATTATGG ATTGTATGAT CTCTTTTTTT AATTTCCTTG CGATTAAAAA ATCCGACAGC
GAAGCAACAA AGCAGTTTAA TTATGGTTTC GGCAAACTGG AAGCTTTGAT GGCAAGTTGC
GACGGTCTTT TTATCGCGGG GATTGGCTGT TTTATTTTTT TCTCATCAAT TAAAAAAATA
GCTGCAAATG ACCATTCTAT CGATTTTGGC ATAGCTTTTT GGGTTATGCT TTTTTCTACG
ATTGTTACTT TTTTCTTGGT TTTGTTTTTA ACAAAGCAGT TTAAACTCGC AAATTCTCTT
GTTATTAAAG CCGATATTTT GCACTATAAA ACTGATCTTT TCACAAATAT CGGCATAATT
ATCACACTTA TTTTGATCAA AATTACAAAT CTTGTCATAA TTGACTGTAT TGTAGGAATT
TTGATTAGCG TTTATATTAT TTTTTCAGCT GTAAAACTCA TAAAAGACGG CATTTACGTT
TTGCTTGACG GCGCACTTGA AAATGAAATA GTAAATGATA TAAAAAATAA AATTGCAAAA
ACGCCCGAAA TTTCAGATTT TCATAATTTT AGAACCAGAA AGAGCGGCGA TACATGTTTT
TTCAGCGCGC ATTTGGTATT TAATTCTGAC ATTTCTCTAA AAAAAGCTCA CGACATTGGC
GATGAAATCG AAAATTTTTT GAAAGAAAAA TATAATTTTT ACACTTGGCA AATAGATTTG
CATTTCGATC CGACTGATGA TTCAAAATAA
 
Protein sequence
MQSKLNAPKI AGITAFCLGG VKLAAGLISG SVAVISSAID SIMDCMISFF NFLAIKKSDS 
EATKQFNYGF GKLEALMASC DGLFIAGIGC FIFFSSIKKI AANDHSIDFG IAFWVMLFST
IVTFFLVLFL TKQFKLANSL VIKADILHYK TDLFTNIGII ITLILIKITN LVIIDCIVGI
LISVYIIFSA VKLIKDGIYV LLDGALENEI VNDIKNKIAK TPEISDFHNF RTRKSGDTCF
FSAHLVFNSD ISLKKAHDIG DEIENFLKEK YNFYTWQIDL HFDPTDDSK