Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0895 |
Symbol | |
ID | 5409502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 832369 |
End bp | 833262 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640870582 |
Product | bifunctional short chain isoprenyl diphosphate synthase |
Protein accession | YP_001406457 |
Protein GI | 154148638 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.224244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAAAA TCGATAATCT AATGCATAAT TTTATCGCAG AGTGTGGATA TGAACCAGCT ATGCAGATGT TTTCTCAAAT AAAATCAGGT AAAAAACTTC GCTCTAAACT TTTATTGAAA ATCGCAGGCG AAAGTGAAAT TTCACTTAAA CTTTGCGCGA TTGTGGAGCT GATTCATGCT GCAAGTTTGC TTCACGACGA CGTTATCGAC GAAAGCGACA TAAGACGTGG AAATCCAAGT ATAAATGCCG TTTTTGGCAG TAAAAATGCT GTAATGCTCG GCGATATTTT TTACAGTAAA GCTTTTTTTG AGCTCTGTTC GTTTAACGAT TTTATATCCA AAACTATTTC AAACGCCGTT TTTAAGTTAA GTATCGGCGA GCTTATGGAT GTAAAAATGA GCGAAAATTT TAATAAAAAC CGCGAAAATT ATCTTACGAT GATTTATTAT AAAACTGCCG GTTTAATAGA ATCGGTTGCA AAAATCGGCG CTTTTTTGGC AAATTCGGAT TGTGAAAAGT TTGCAGAATA CGGCAAAAAT TTAGGACTTG CTTTTCAAAT AATTGATGAT ATTTTAGACA TAACTCAAGA TAGCAAAAAG CTTGGAAAAC CGGCACTTAA TGATTTTAAA GATGGTAAAA CAACGCTTCC TTATATTTAT CTTTACGAAA AACTTCCATT AAATGAACGC GAAATACTGC AAAGTTATTT TAAAAAAGAG CTAAACGACG AACAGAGCGC ATGGATAAAA GATAAATTTC AAGAATTTAA AATAATTGAA TTTTGTATAG ATGAAGCTAA AAATTTCGGT AAAAAAGCGG TTGAGGCTGT TGAAGAATTT AATAACAAAG AACTTATAAA AATCGCTGAA AATATGATAA ATAGGGAATT TTAA
|
Protein sequence | MDKIDNLMHN FIAECGYEPA MQMFSQIKSG KKLRSKLLLK IAGESEISLK LCAIVELIHA ASLLHDDVID ESDIRRGNPS INAVFGSKNA VMLGDIFYSK AFFELCSFND FISKTISNAV FKLSIGELMD VKMSENFNKN RENYLTMIYY KTAGLIESVA KIGAFLANSD CEKFAEYGKN LGLAFQIIDD ILDITQDSKK LGKPALNDFK DGKTTLPYIY LYEKLPLNER EILQSYFKKE LNDEQSAWIK DKFQEFKIIE FCIDEAKNFG KKAVEAVEEF NNKELIKIAE NMINREF
|
| |