Gene CHAB381_0866 details

Gene Information

• Locus tag: CHAB381_0866
• Symbol: hypF
• ID: 5408851
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter hominis ATCC BAA-381
• Kingdom: Bacteria
• Replicon accession: NC_009714
• Strand: +
• Start bp: 807663
• End bp: 811037
• Gene Length: 3375 bp
• Protein Length: 1124 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 640870555
• Product: [NiFe] hydrogenase maturation protein HypF
• Protein accession: YP_001406430
• Protein GI: 154149031
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0068] Hydrogenase maturation factor
• TIGRFAM ID: [TIGR00143] [NiFe] hydrogenase maturation protein HypF

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACTTGA AATTTGAGAT TGCCGGACGC GTTCAAGGCG TAGGTTTTCG ACCTTTTATT 
TACAGAATCG CAACTCGTTT CGGTTTAAAA GGAGTTGTTT TTAATGACGG CGAGGGCGTA 
AAAATATTTG CCTCGGCGGA CAAGCTTAAG ATTGAGAAAT TTAAAAAGGC TCTTTTTGCA 
GAGCTTCCGC CGCTGGCAAA AATTGAAAAA ATTAAAATAA CTGAAACTTT ACCGCAGAAT 
TTCACAGATT TTAAAATAGT AAAATCCGAA AATTCTCAGA TTTTTACGCC GATTTTACCG 
GATTTTGCGA TTTGTGATGA TTGTAAAATG GAATTTTATG ATACAAAAAA TGAGCGTTTT 
CACTATCCGT TTATAAATTG CACGAATTGC GGACCGAGAC TTTCTATCAT TAAAGCGCTT 
CCTTACGATC GTAAAAATAC GACAATGAAT GTATTTAAAA TGTGTGAAAA GTGTGAAGAT 
GAATATAAAA ATCCTTTAAA TCGCCGTTAT CACGCAGAGC CGATTTCGTG CCGAAAATGC 
GGACCCGAGC TTTTTTTAAA AAATATGCAA GGAAAAATTC TTGCTTCAGG AGAAGATGGT 
GTAAAAAAGG CAACCGAACT TTTGTATGCC GGAAAAATTG TAGCCGTTAA AGGAATGGGT 
GGATTTCATA TAATGGCTGA TGCGTGCAAT TTTGAAGCAG TCAAAACACT GCGTGAGCGA 
AAACATCGTC CGAATAAGCC GTTTGCTGTA ATGTGCAAAG ATGAAAATAT GGCAAAAAAA 
ATTGCTTTTA TTTCGCCTTT TGAAAGTAAA ATTTTAAATT CAAATATAAA ACCGATTTTG 
ATTTTAAAAA TGAAAAATTC GCAAAATTTT ATGCAAAATG ATACAAATAA TTTTACTGAA 
AATAGTGAAA TTTTGCCAAA TTTTAATGAA AACAGTGAAA ATTTAAAAAA AAATAAAAAT 
TTTAAAGCTT CGAGTAATTT ACAGCAAAAT GAAAATTTTA AAATAAATAG CCAAGATAGT 
TGGCAAATAG GCGAAGATTA TATAAAATTA GCTCAAAATA TCGCTCCGAA TCTTGATAAA 
ATCGGTATTT TTTTGCCAAA TACCGGACTT CATCTTTTGC TTTTTGAATA TTTTTCTAAC 
CCTTTAATTG CAACAAGCGC CAATATTAGC GGTGAACCGA TTATTTTTAA TGAAGACGTT 
TTACTTAAAA AACTTTTTAA TGTGGTTGAT TTTTATCTTG ACAATAACCG TGAAATTTTA 
ACACCAAGTG ATGATAGTAT CGCACAAAGT TTGTATTTTA CAGATGATTT TGATGAAATT 
GATAAAAACG GTTTTGTGCC GAATGTTTTT GAAAATCAAA ATTTAACCCA AAGCGAAATA 
AACGGCAAAA ATCAATTTAA AAATTCACAC AATTCTGAAA CTTTTAAGCA AAATATTTTT 
TTTAAAAAAA ATGAAATTTT CCAAAAAATA GAGAATTTGA AAAAAGCTCA AATTTTTGAT 
CAGAATTTGA ATTTTAAAAA AAATATAAAA AATATAATTC CTGCTTTTTT TAGTAAATTT 
TTCAATCAAG TTGAAAATAG CGAAAAAGCC GAATTTTTAT GTCAAAATTC AAATAAAGTG 
AAATTTTGCA ATCAAAATGA AATAATCGAA AAAACAGATA TTCTAAAAGA AAATGAAATC 
ATAGAAAAAA ACTTAAATTT TACAAAATTT TCAGATGAAA CTGGACTTTT GCAAGAAAAC 
GCAAAAGTTT TTAAAAACAT CAACTATAAA ATTTCAAATC AAGATGAAAT TTTACATATA 
AATAAATCAG TTTTTTCGGA ACAAAACAAA TTTCAAAATT CAATAACTGA AAAAAATGTT 
GAAAACAGTT TTAAAAAATC TCACAATAAA ATTTCTCAAA AAATAGGGCG CTCTTCAAAT 
CAAAATGAAA TTTCCGTCAG AGCAAATAAT TTTACAAATT ATGAAATTTC AAATCAAAAT 
AATAATTTTC AAAACGATGA AAGTTTTGAT GAAAATTTCA AGTTTTCAAA CAAAAATGAT 
ATTTTTCGCA AAAGCGCTTT TTTTAGAAAA AGTAAAATTT CTTTTTTAAA TAAAAAGGAA 
ATGTATAAAA AATTCGAAAT TCAAGAAAAA AATGCTTTCT CTCAAAAAAA CGGAATTTTA 
AATGAAAATC AGGCTAAAGT GGAAAATCTT TTTGAGATTG CAAATATACC GAACTGTTTT 
ACTCGAAGTA AAAATCTTCG AAAATGTATG ACTGAAAATT CTATTTTTAA TCAAAAAGTT 
CAGTTTTTAC GCACTTCACG CGGGTTAAAT CCAAAAATTT TCATAAGTGA TTTTAAGTGT 
AAAGGCACTT TTTTGGCGCT CGGTTCTGAA CTGAAAAATC AATTCGCCAT TTACAAAGAC 
GGACTGATTT TCATTTCGCC TTACATCGGC GATCTTAAAA ATATCGCTAC TTTCGATCGT 
TTTTTGAAAC TTTTGCAAAT TTTTACTGAC ACTTATAAGT TAAAATTCGA TTGTATTATA 
GGCGATTTGC ATCCTAATTT TTTGCATACG AAATATTTTG AAAAGCAGGG TTTTAAAGTG 
ATTAAATTTC AGCATCATTT TTCACATTTA GTTTGCGCGC TAGCCGAAAA TTCACTGCTT 
AAAAGTGGCA AAAAGTTTCT TGGATTTAGT TTTGACGGCA CAGGATACGG CTTGGATGGG 
CATATTTGGG GCGGTGAAGT GATGATTTTT GATGAGTTTT GTTTTACGCG TGTGACAAAA 
TTTGAAGAAT TTTCACTAAT TGGCGGCGAT AACGCGATTA AAAATATCTA CAAAATCGCA 
ATTTCACTTA TTTTTAAATT CGGTATTGAG AAAAAAGCGG CAAAATTTTT AACAAAATTC 
GATAAAAACG AGGTTAGAAA TCTAAAAATT TTAGAAAAAA AATCCATAAA AACAAGTTCG 
CTTGGAAGAA TTTTTGACGC TTTTGCGTGC GTAATCTGCC ATTTGGATAA AATCACATAT 
GATGGCGAAT CCGGTATGAA TTTAGAAAAA TTATACATAC AAAATTATGT AAAATTTTAT 
GAATTTGAGC TTAAAAACGG CGAAATAAAA TTTGGCAAAG TATTTGAACA GATTTTTAGT 
GACGAACCGT GTGTAGCCGC TACAAAATTT ATAAACGGAA TTGCGGAACT TATTTCAAAA 
ATTGCTTTAA AATATGAAAA TGACGTAGTT TTAAGCGGTG GCGTTTTTCA AAACAAGACG 
TTGATGAACC GAATATCTAA AAATTTTGCA AAAATAGGGC GAAAATTTTA TGCAAATTTA 
GAGAATCCTA CAAACGACAG CGGCATAGCT TACGGTCAAT TAAATGCATT TTTGTCTCAA 
AACGACAAAG AATAA 

 

Protein sequence

MDLKFEIAGR VQGVGFRPFI YRIATRFGLK GVVFNDGEGV KIFASADKLK IEKFKKALFA 
ELPPLAKIEK IKITETLPQN FTDFKIVKSE NSQIFTPILP DFAICDDCKM EFYDTKNERF 
HYPFINCTNC GPRLSIIKAL PYDRKNTTMN VFKMCEKCED EYKNPLNRRY HAEPISCRKC 
GPELFLKNMQ GKILASGEDG VKKATELLYA GKIVAVKGMG GFHIMADACN FEAVKTLRER 
KHRPNKPFAV MCKDENMAKK IAFISPFESK ILNSNIKPIL ILKMKNSQNF MQNDTNNFTE 
NSEILPNFNE NSENLKKNKN FKASSNLQQN ENFKINSQDS WQIGEDYIKL AQNIAPNLDK 
IGIFLPNTGL HLLLFEYFSN PLIATSANIS GEPIIFNEDV LLKKLFNVVD FYLDNNREIL 
TPSDDSIAQS LYFTDDFDEI DKNGFVPNVF ENQNLTQSEI NGKNQFKNSH NSETFKQNIF 
FKKNEIFQKI ENLKKAQIFD QNLNFKKNIK NIIPAFFSKF FNQVENSEKA EFLCQNSNKV 
KFCNQNEIIE KTDILKENEI IEKNLNFTKF SDETGLLQEN AKVFKNINYK ISNQDEILHI 
NKSVFSEQNK FQNSITEKNV ENSFKKSHNK ISQKIGRSSN QNEISVRANN FTNYEISNQN 
NNFQNDESFD ENFKFSNKND IFRKSAFFRK SKISFLNKKE MYKKFEIQEK NAFSQKNGIL 
NENQAKVENL FEIANIPNCF TRSKNLRKCM TENSIFNQKV QFLRTSRGLN PKIFISDFKC 
KGTFLALGSE LKNQFAIYKD GLIFISPYIG DLKNIATFDR FLKLLQIFTD TYKLKFDCII 
GDLHPNFLHT KYFEKQGFKV IKFQHHFSHL VCALAENSLL KSGKKFLGFS FDGTGYGLDG 
HIWGGEVMIF DEFCFTRVTK FEEFSLIGGD NAIKNIYKIA ISLIFKFGIE KKAAKFLTKF 
DKNEVRNLKI LEKKSIKTSS LGRIFDAFAC VICHLDKITY DGESGMNLEK LYIQNYVKFY 
EFELKNGEIK FGKVFEQIFS DEPCVAATKF INGIAELISK IALKYENDVV LSGGVFQNKT 
LMNRISKNFA KIGRKFYANL ENPTNDSGIA YGQLNAFLSQ NDKE