| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0654 |
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| Symbol | trmE |
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| ID | 5408667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | + |
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| Start bp | 599488 |
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| End bp | 600888 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640870355 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001406236 |
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| Protein GI | 154149158 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA CTATTGTAGC CGTCGCAACC GCTCATGGAA TTGGCGGAAT AAGTATCGTC
AGGCTCAGTG GAGAAAATGC ACTGAGCCTT AGTGATATTT TAATAAATAA AAACCGCAAA
AAAAATAAAA CTCAAAATTC CGTTTCCAGC TCTCAAAACA GGATACAAAA TTTTAAAAAA
ATCAATTTAA AACCGCGTTA TGCCACACTT TGCGAGCTAT ATGACAATGA TGGAAATTTT
ATGGACGAGA GTGTTGTTAT ATATTACAAA TCCCCAAATA GCTTTACCGG CGAAGATATA
GTGGAATTTC AAATTCATGG CGGATTTACG CTTGAAAATC TGATAATGGA CGAACTGATA
ACAAACGGCG CAAGAATTGC AATGCCTGGA GAATTTAGCA AAAGAGCGTT TTTAAATGAC
AAAATGGATC TAAGCAAAGC TGAAGCTATA CAAAGTATTA TTTTATCGCG TTCAAAAAGC
GCCGCTAAAA TTTTAGCCAG AAATTTGCAC GGTGAACTTA AAAATTTTGT AATTGATTTG
CGTAAAGAAA TAGTTAAAAC TATGGCATTT GTTGAAACTT GCATTGACTA TGCCGACGAC
GATTTGCCAA ATGACATTTT GGATAAAATA CAAAATTTAT TAAGTGAAAA TATAACAAAA
ATCGATGAAA TTACTCAAAT AAGTGCGTCA AGACGCGGAT TGTTAGAAGG CTTTAAAGTA
GCCATTATAG GCAAACCGAA TGTCGGAAAA AGTTCTATTT TAAATTCACT TTTAAAATTT
TCTCGTGCTA TTGTAAGTGA TGAAGCCGGA ACTACTCGCG ATAGAATAGA AGAAAATTTG
CAAATCGGTT CACATTTAAT TCGCATAATT GATACGGCAG GCATTAGAAA AAGTGAAAAC
AGTGTCGAAA ATATCGGTAT TTCATATTCC ATAAAAGCCG CAAACGAAGC TGATATAATT
TTAGCTGTTT TTGATGCTTC GCGAGAATTT GATAAAGAAG ACGAGAAAAT TTTTGAAATT
TTACAAAATC AAAAAGATAA AAAGATTATT AAAATTTTAA ATAAAATTGA TCTTGCTTTA
AAATTTAAAG CTGGAAATTC AGATAATTTT TTGAAAATTT CAGCTAAAAA CGATACAAAA
ATTATCACAA AAGTTTTAAA TGATTATTTA AATTCTCAAA ATTTTGACGG TATAATGCTT
AGTTCAAATC GTCAAATAAT GGCATTTTCA AATGCCGGAA AAGCTTTAAA AAGAGCGCAA
AATTTATTAA ATGAAAATTC TCTTGAACTT TTTGCATTTG AGCTGAACAT CGCTATAAAA
GAAATTGCAA GCATTTACAA GCCTTTTGAG CGGGACGAAA TACTTGAGTC TATGTTTAGC
AACTTTTGTC TTGGTAAATA A
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| Protein sequence | MSETIVAVAT AHGIGGISIV RLSGENALSL SDILINKNRK KNKTQNSVSS SQNRIQNFKK
INLKPRYATL CELYDNDGNF MDESVVIYYK SPNSFTGEDI VEFQIHGGFT LENLIMDELI
TNGARIAMPG EFSKRAFLND KMDLSKAEAI QSIILSRSKS AAKILARNLH GELKNFVIDL
RKEIVKTMAF VETCIDYADD DLPNDILDKI QNLLSENITK IDEITQISAS RRGLLEGFKV
AIIGKPNVGK SSILNSLLKF SRAIVSDEAG TTRDRIEENL QIGSHLIRII DTAGIRKSEN
SVENIGISYS IKAANEADII LAVFDASREF DKEDEKIFEI LQNQKDKKII KILNKIDLAL
KFKAGNSDNF LKISAKNDTK IITKVLNDYL NSQNFDGIML SSNRQIMAFS NAGKALKRAQ
NLLNENSLEL FAFELNIAIK EIASIYKPFE RDEILESMFS NFCLGK
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