Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0597 |
Symbol | |
ID | 5409564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 545152 |
End bp | 546798 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640870301 |
Product | ApxIVA Var3 |
Protein accession | YP_001406184 |
Protein GI | 154148123 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGAG AATTAGTTGC GAAAGCGGAA CTCGACAGAG TTGAAAAAAT GCTTGAAGAA GCTGGTATTA TCAGAAATGG TGAAGTAAAT TTAGCCAAAT TGGCTATAAA TGATGCTAGT AAAACAATTG ATATATTGGC TGATGAACAT TTAGAAAAAA TGAAACACGG GAAAGGTGGC TTATTCCTAG TTACACAGGC TGGAAATATA GCAGTAGATT TAGCAAATGG GGAAGCTGGC GTAAAAACAG CTCTAAATTT AGCAATTGAT ACTGTGTTAT TTGTAGCACA AATTACGCCT ATGGGTAGAG CTTTTCAAGT GGCAGTAAAA GCCATAGATG GATTAAATAC TATTGCCTCC CACTTCGGCT ACGATATAGG AAGCCTAGCA GGAGAAATTT ACGATTGGGC TACAAAAGGA GATAAATATA AAGACTATAT TACACAAGAT GGATTTCTCC GTGTAGTTAT GGACGACGGC ACGGTATATA TGAGACCGCT TAAAGGAAGA TATGGTTTAG CAACTGGTAA TTATATGAAC GATGTATTAT TTGGTGGCGA TTGGAACGAC ACACTTCAAG GTGGTAATGG TAGCGACCTA CTCATCGGTG GCGACGGATT TGATACATAC AATGCAGGAA CACTTGACAT TATCCGTGAT AGCGACGGCA AAGGCTCAGT TCATTTCAAC AGACACAAAC TAACAGGCGG AACTTATGAT AAAGACAGAG ACCTTTATAT TTCAGATGAT TATATCGAAT ACAAACTCCA CGATGACGGA AGATTAGTAG TAAGTGATAT GGGAGAAAAT ATAGTCATAG AAAATTTTAA TAAAGACAAT AATGATTTAG GCATAATACT AATAGACCCA AAAGATGTAG TAGTTACCAT ACACGACAAT CAAGCAAATG AGGGTGGTAA TGGCAAACAT ACGCTAGGGT TTAAAGTAAG TTTAAATAGA AAATTAGAAG CAGGAGAATA CTTAACACTA TACATAAACG GACAATTGGT TAAATTTACA GAAAATGAAC AAGAAAAAGA TAATGCTTAT ATCTATGAGT GGGACGGAAA CGAAAGCAAA GACGGAGATA GAAAATTTGA AGTAAGTGGC TCTGTTTTAC AAAGTGGAAC TTCTAAAAAT CTAAATGTAA AATATATTCA CCCTGCAAAA GGTCTCATCA AAGACGACGA CCGTGACGAT GACCCTGACC CAGAGCGTGA ATATTCTCCG ATTGTGATTG ACTTGGGTAA TGATGGCATA AACTCACACG CACTAAATTA TACTATAAAT TTTGATTTAG ATAATAATGG TTTTAAAGAA GCCACAGGTT GGGTAAGCGG CGATGATGCA CTTCTAGCAA TAGATAAAAA TAACAACGGC ATAATAGATA ATGGAAGCGA ACTCTTTGGA AATAAAAGTA TCTCAGATAG TGCTTTCTCA TACACAAATT CATCTTTAAA CAACGGCTTT GAAACACTAA AAAGCTATGA CAGCAACAAT GACGGCATAA TAGATAGCCA AGACGCTGAA TTTGACAAGC TACTTCTTTG GCAAGATAAA AACTCCAACG GCATAAGCGA AACAGACGAA TTAATAAAAC TAAGCGATAA AGCAGAATTT GCAAATTTAA ACTTACTTGT TGCTTGA
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Protein sequence | MSRELVAKAE LDRVEKMLEE AGIIRNGEVN LAKLAINDAS KTIDILADEH LEKMKHGKGG LFLVTQAGNI AVDLANGEAG VKTALNLAID TVLFVAQITP MGRAFQVAVK AIDGLNTIAS HFGYDIGSLA GEIYDWATKG DKYKDYITQD GFLRVVMDDG TVYMRPLKGR YGLATGNYMN DVLFGGDWND TLQGGNGSDL LIGGDGFDTY NAGTLDIIRD SDGKGSVHFN RHKLTGGTYD KDRDLYISDD YIEYKLHDDG RLVVSDMGEN IVIENFNKDN NDLGIILIDP KDVVVTIHDN QANEGGNGKH TLGFKVSLNR KLEAGEYLTL YINGQLVKFT ENEQEKDNAY IYEWDGNESK DGDRKFEVSG SVLQSGTSKN LNVKYIHPAK GLIKDDDRDD DPDPEREYSP IVIDLGNDGI NSHALNYTIN FDLDNNGFKE ATGWVSGDDA LLAIDKNNNG IIDNGSELFG NKSISDSAFS YTNSSLNNGF ETLKSYDSNN DGIIDSQDAE FDKLLLWQDK NSNGISETDE LIKLSDKAEF ANLNLLVA
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