Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0572 |
Symbol | ddl |
ID | 5408338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 522022 |
End bp | 523050 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640870277 |
Product | D-alanyl-alanine synthetase A |
Protein accession | YP_001406160 |
Protein GI | 154148214 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.140397 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTG GAATTATTTT CGGTGGTCAA AGTTATGAAC ATGAAATCAG TATAGTTTCC GCAATTTCGC TTAAAAAAGT AATAAAAAAA GAATGCGCTT ATGTTTTTTG CGATCAGGAT CGCAACTTTT ATTTGATAGA ACCGAAAAAT ATGATTGCAA ACTATTTCAG CAGTGGTGAA TATAAAAAAG CAAAAGAGCT TACAATAGCA AGCAATGGAT TTTACGTAAA CGGAATGTTT TCAAAAACAC GCGTAGAAGC TGATGTATTT GTAAATGTAA TCCACGGATG CGATGGAGAA GACGGTAAAT TAGCCTCACT TCTGGAATTT TTCAATATTC CTTTTATAGG ACCAAGACTG GAAGCAAGCG TAATAAGCTA TGATAAAGAG CTTACCAAAA ACTTAGCTAA AGCCGCCGGT ATTAAAACTA TAGAATATCA AATTATTAAA AGTTCAACTC TTCCTAGCAT TCCATATCCT CTAATCGTAA AACCATCTCA CCTAGGAAGC AGTATAGGCA TAAAAATAGT TAAAAATCAC AATGAATTAA GTTACGCTAT CGATACGGCT TTTGAACTTG ACAGTAGCGC CATTATAGAA CCATATATAG AAGATGTAAA AGAATACAAT CTTGCCGGTT GCAAAATAGA CGGAGAGATA GAATTTTCTA TCATTGAAGA ACCGCAAAAA GATAAATTTC TGGATTATTT TCAAAAATAT ATGGATTTTT CACGCTCAGG AAAACCTCAA GAAGCAAATC TGGGCTTATC CGTAAAAGAT AATATGAAAG AGGCGTTTAG ACGAGTTTAT AACTACGGTG AATTTGACGG CGCGATTATT CGTTGCGACT TTTTTGTTAT AAATAATGAA GTTTATCTAA ATGAAATCAA TCCGAATCCT GGAAGTTTGG CAAACTATTT ATTTAATGAT TTTAACGATG TACTTAATAG ACTGGCTATG AATTTACCGT CAAATAAACA CATTCAAGTA GGATATGAAT TAATAAATGC TATAGTGAAA AATAAATAA
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Protein sequence | MKFGIIFGGQ SYEHEISIVS AISLKKVIKK ECAYVFCDQD RNFYLIEPKN MIANYFSSGE YKKAKELTIA SNGFYVNGMF SKTRVEADVF VNVIHGCDGE DGKLASLLEF FNIPFIGPRL EASVISYDKE LTKNLAKAAG IKTIEYQIIK SSTLPSIPYP LIVKPSHLGS SIGIKIVKNH NELSYAIDTA FELDSSAIIE PYIEDVKEYN LAGCKIDGEI EFSIIEEPQK DKFLDYFQKY MDFSRSGKPQ EANLGLSVKD NMKEAFRRVY NYGEFDGAII RCDFFVINNE VYLNEINPNP GSLANYLFND FNDVLNRLAM NLPSNKHIQV GYELINAIVK NK
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