| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0518 |
|---|
| Symbol | |
|---|
| ID | 5408930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | + |
|---|
| Start bp | 474813 |
|---|
| End bp | 475607 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640870223 |
|---|
| Product | cation ABC transporter, permease protein |
|---|
| Protein accession | YP_001406106 |
|---|
| Protein GI | 154148927 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAA TTTTATCTTT AAATTTTATG CAAAATGCTT TTTTGGGTGG AATTTTAGTC
AGCATAATTT GCGGCGTTGT CGGCTCATTA ATCGTAATAA ATAAAATGTC ATTTATAGCA
GGAGGCGTGG CGCATGGCGC TTATGGCGGC ATTGGAATTG CCTTTTTTCT TGGAATTTCG
CCGATTTTCG GTGCAAGTGT TTTTGCATTT TTTTTAGCAT TAGTGATAGC TTTTATAAGT
GAGCGGAATT TGGAACGATT CGATTCTGCG ATAGGTGCTA TTTGGGCGTT TGGAATGGCT
ATAGGAATTA TTTTCATAGA CATTACTCCA GGGTATAGTT CCGGCTTAAT GGGCTATCTT
TTTGGCTCGA TTCTAGCTAT AAATGAAGAA ATACTTGCAT TTATCGGCAT TTGTGCCTTG
ATTTTTACAC TTTTAATCAT ACTTTTTTAT AGACAGTTTC TAGCGATTAG TTTTGATGCT
GAGTTTGCAG GTTTGCGCGG CGTAAATGCA AGGGCATTTT ATTATCTGCT CGTAATTATG
ATGGCTTTTA GCGTCGTAGC TTGCATACAG GTTGTCGGAT TGATTTTAGT CATCGCGCTC
ATTACAATTC CGCCTTTTAT AGCTGAAAAA TTTTCCAAAA AATTAAGCGT AATGATGATT
TTAGCGACTT TTATTTCTGC TTTTTTCTGC ATTAGCGGAC TTTTGTTAAG TTATTATTTT
AATTTAACAA GCGGCGCAAT TATTATACTT ATAGCATCTA TTTGCTTTTT TATTTCCGTT
TTAATTAAAA AATAA
|
|---|
| Protein sequence | MSEILSLNFM QNAFLGGILV SIICGVVGSL IVINKMSFIA GGVAHGAYGG IGIAFFLGIS
PIFGASVFAF FLALVIAFIS ERNLERFDSA IGAIWAFGMA IGIIFIDITP GYSSGLMGYL
FGSILAINEE ILAFIGICAL IFTLLIILFY RQFLAISFDA EFAGLRGVNA RAFYYLLVIM
MAFSVVACIQ VVGLILVIAL ITIPPFIAEK FSKKLSVMMI LATFISAFFC ISGLLLSYYF
NLTSGAIIIL IASICFFISV LIKK
|
|---|
| |